Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC28Q86X40 AC022655.2-201ENST00000577280 318 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 MIR3160-1-201ENST00000577972 85 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 MIR4458-201ENST00000578872 75 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC28Q86X40 AL049634.3-201ENST00000604968 457 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 AC012557.1-201ENST00000607115 611 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 AC006946.3-201ENST00000609791 756 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC28Q86X40 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC28Q86X40 AC010809.3-201ENST00000621310 641 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 AC124312.6-202ENST00000623624 418 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 AC091905.1-201ENST00000624400 311 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC28Q86X40 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LRRC28Q86X40 PRO1804-201ENST00000623780 2050 ntBASIC3.48□□□□□ -1.85
LRRC28Q86X40 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC28Q86X40 AL445437.1-201ENST00000623157 3087 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 U3.15-201ENST00000365398 212 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 RNU1-13P-201ENST00000384499 162 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 RN7SKP263-201ENST00000411194 309 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 OR4C10P-201ENST00000434991 931 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 USP9YP7-201ENST00000436723 430 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 HMGB1P37-201ENST00000439613 609 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 USP9YP32-201ENST00000452432 430 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 NANOGP10-201ENST00000453325 895 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 AC098824.1-201ENST00000453565 980 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 RPL7P1-201ENST00000468161 747 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 RPL7P9-201ENST00000468715 747 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 RPL7L1P8-201ENST00000469911 741 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 AC007537.2-201ENST00000472093 511 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 NDUFB4P9-201ENST00000511646 388 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 SMARCE1P4-201ENST00000523647 241 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 AL390816.3-201ENST00000604527 1066 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 BRDTP1-201ENST00000605735 677 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 AC010857.1-201ENST00000606398 594 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 RNU4-89P-201ENST00000607443 133 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 AC103710.3-201ENST00000608157 948 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 MIR6867-201ENST00000610636 67 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 RNVU1-4-201ENST00000612985 164 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 OR5AC4P-202ENST00000642086 985 ntBASIC3.47□□□□□ -1.85
LRRC28Q86X40 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
LRRC28Q86X40 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.47□□□□□ -1.85
LRRC28Q86X40 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.46□□□□□ -1.85
LRRC28Q86X40 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC28Q86X40 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC28Q86X40 RNU6-328P-201ENST00000390887 106 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC007064.3-201ENST00000422608 359 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 OR5AW1P-201ENST00000426334 1006 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 AL358472.1-201ENST00000431295 329 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC006011.1-201ENST00000442758 349 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 MTND6P32-201ENST00000457611 483 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 RPL38P1-201ENST00000460914 211 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 RPL9P32-201ENST00000464118 620 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 AL161747.1-201ENST00000480068 358 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 KRT19P6-201ENST00000510983 209 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 RNU6-1231P-201ENST00000517185 103 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
LRRC28Q86X40 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 AL121576.1-201ENST00000556055 276 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 BNIP3P5-201ENST00000562290 498 ntBASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.46□□□□□ -1.86
LRRC28Q86X40 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms