Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SHFQ7M4L6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHFQ7M4L6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 Z99496.1-201ENST00000469424 1477 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHFQ7M4L6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHFQ7M4L6 U3.25-201ENST00000391209 220 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 ATP5F1P3-201ENST00000397213 657 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AL161909.1-201ENST00000397390 712 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 RNU2-65P-201ENST00000410162 185 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AL161449.1-201ENST00000414531 1199 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AF186996.5-201ENST00000418098 904 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AL139421.1-201ENST00000423010 169 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 RHOT1P3-201ENST00000436571 331 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 UBE2D3P1-201ENST00000436669 444 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 ACTR3P2-201ENST00000439585 1257 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 MTND3P1-201ENST00000441336 220 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 RAB11AP1-201ENST00000442978 646 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 RPL7P59-201ENST00000447700 943 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC005008.1-201ENST00000456151 612 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 RN7SL172P-201ENST00000460535 303 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 RPL5P24-201ENST00000463742 885 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 UBA52P3-201ENST00000491303 382 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 RNA5SP43-201ENST00000516559 110 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 RNA5SP135-201ENST00000517019 125 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 HIGD1AP6-201ENST00000521833 279 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC005832.3-201ENST00000537929 631 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 GCSHP4-201ENST00000538792 439 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 OR11J2P-201ENST00000555298 907 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC008015.1-201ENST00000555505 465 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC109446.2-201ENST00000567872 497 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 RPL26P30-202ENST00000602923 645 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 PSMA6P4-201ENST00000603247 718 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AL158042.1-201ENST00000605338 460 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 MIR3974-201ENST00000637126 96 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC027290.2-201ENST00000623210 18662 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SHFQ7M4L6 AC010329.2-201ENST00000595195 2737 ntBASIC4.32□□□□□ -1.72
SHFQ7M4L6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SHFQ7M4L6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 KPNA2P2-201ENST00000419546 1489 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 SNURFL-201ENST00000309296 343 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SHFQ7M4L6 MIR223-201ENST00000385204 110 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 U3.36-201ENST00000408418 213 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 RNU4-72P-201ENST00000410754 173 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 RNU6-272P-201ENST00000411028 104 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AP000534.2-201ENST00000412729 568 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 MFSD13B-201ENST00000420133 1290 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 USP9YP26-201ENST00000421008 661 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 NPM1P24-201ENST00000428039 894 ntBASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.31□□□□□ -1.72
SHFQ7M4L6 AL365396.1-201ENST00000430854 671 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms