Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 HIGD1AP12-201ENST00000427832 281 ntBASIC4.56□□□□□ -1.68
RFX7Q2KHR2 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 TRBV12-2-201ENST00000489763 344 ntBASIC4.56□□□□□ -1.68
RFX7Q2KHR2 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.56□□□□□ -1.68
RFX7Q2KHR2 AC004069.2-201ENST00000505438 1114 ntBASIC4.56□□□□□ -1.68
RFX7Q2KHR2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 AL158196.1-201ENST00000616786 434 ntBASIC4.56□□□□□ -1.68
RFX7Q2KHR2 LINC00901.1-201ENST00000617252 152 ntBASIC4.56□□□□□ -1.68
RFX7Q2KHR2 AC015967.1-201ENST00000619893 476 ntBASIC4.56□□□□□ -1.68
RFX7Q2KHR2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.56□□□□□ -1.68
RFX7Q2KHR2 MTND5P12-201ENST00000502851 1449 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 LINC01355-201ENST00000566551 5444 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 RNU1-18P-201ENST00000363062 164 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 RNA5SP51-201ENST00000364750 119 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 RNU1-89P-201ENST00000384592 164 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 ATP5A1P2-201ENST00000412323 255 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AC010740.1-201ENST00000417035 684 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AC068533.1-201ENST00000418542 415 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 MTND2P15-201ENST00000418575 892 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AC114814.2-201ENST00000419195 485 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AP000907.1-201ENST00000428428 510 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 HMGN1P15-201ENST00000513870 295 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AL391497.1-201ENST00000608671 547 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AC012314.7-201ENST00000619693 93 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 AC015908.5-201ENST00000623289 343 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 U6.105-201ENST00000637379 88 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 NEAT1-202ENST00000501122 22743 ntBASIC4.55□□□□□ -1.68
RFX7Q2KHR2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.55□□□□□ -1.68
RFX7Q2KHR2 MIR7-3-201ENST00000384898 110 ntBASIC4.54□□□□□ -1.68
RFX7Q2KHR2 MIR183-201ENST00000384958 110 ntBASIC4.54□□□□□ -1.68
RFX7Q2KHR2 RNA5SP424-201ENST00000390988 115 ntBASIC4.54□□□□□ -1.68
RFX7Q2KHR2 RPL7P60-201ENST00000397636 735 ntBASIC4.54□□□□□ -1.68
RFX7Q2KHR2 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 RPL6P21-201ENST00000418672 846 ntBASIC4.54□□□□□ -1.68
RFX7Q2KHR2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 HMGN2P31-201ENST00000432430 273 ntBASIC4.54□□□□□ -1.68
RFX7Q2KHR2 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 AC107027.3-201ENST00000565095 3473 ntBASIC4.54□□□□□ -1.68
RFX7Q2KHR2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.54□□□□□ -1.68
RFX7Q2KHR2 NCAPGP1-201ENST00000505112 1814 ntBASIC4.53□□□□□ -1.68
RFX7Q2KHR2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFX7Q2KHR2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RFX7Q2KHR2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.53□□□□□ -1.68
RFX7Q2KHR2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RFX7Q2KHR2 AC104619.4-201ENST00000510773 249 ntBASIC4.53□□□□□ -1.68
RFX7Q2KHR2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.53□□□□□ -1.68
RFX7Q2KHR2 SOD1P3-201ENST00000518682 454 ntBASIC4.53□□□□□ -1.68
RFX7Q2KHR2 OR7E13P-201ENST00000526052 910 ntBASIC4.53□□□□□ -1.68
RFX7Q2KHR2 AP000619.3-201ENST00000535634 1127 ntBASIC4.53□□□□□ -1.68
RFX7Q2KHR2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.53□□□□□ -1.68
RFX7Q2KHR2 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.53□□□□□ -1.68
RFX7Q2KHR2 AP000553.6-201ENST00000641242 118 ntBASIC4.53□□□□□ -1.68
RFX7Q2KHR2 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.53□□□□□ -1.68
RFX7Q2KHR2 AC063923.1-201ENST00000478982 1619 ntBASIC4.53□□□□□ -1.68
RFX7Q2KHR2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.69
RFX7Q2KHR2 RPS12P5-201ENST00000423449 371 ntBASIC4.53□□□□□ -1.69
RFX7Q2KHR2 MTND6P18-201ENST00000439477 513 ntBASIC4.53□□□□□ -1.69
RFX7Q2KHR2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RFX7Q2KHR2 HMGB1P16-201ENST00000447155 540 ntBASIC4.53□□□□□ -1.69
RFX7Q2KHR2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.53□□□□□ -1.69
RFX7Q2KHR2 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.53□□□□□ -1.69
RFX7Q2KHR2 AC005726.1-201ENST00000494679 427 ntBASIC4.53□□□□□ -1.69
RFX7Q2KHR2 CDH12P2-201ENST00000504393 298 ntBASIC4.53□□□□□ -1.69
RFX7Q2KHR2 SCARNA13-201ENST00000516672 275 ntBASIC4.53□□□□□ -1.69
RFX7Q2KHR2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.53□□□□□ -1.69
RFX7Q2KHR2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms