Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 MIR3167-201ENST00000579623 85 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC063977.7-201ENST00000594454 337 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDH1Q08174 KC877982.1-201ENST00000602313 470 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 BBIP1P1-201ENST00000602999 279 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 OR10AB1P-201ENST00000609613 938 ntBASIC6.01□□□□□ -1.45
PCDH1Q08174 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.01□□□□□ -1.45
PCDH1Q08174 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.01□□□□□ -1.45
PCDH1Q08174 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
PCDH1Q08174 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCDH1Q08174 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PCDH1Q08174 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.01□□□□□ -1.45
PCDH1Q08174 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6□□□□□ -1.45
PCDH1Q08174 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 VPS35P1-201ENST00000563400 1518 ntBASIC6□□□□□ -1.45
PCDH1Q08174 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDH1Q08174 RNU6-223P-201ENST00000362830 107 ntBASIC6□□□□□ -1.45
PCDH1Q08174 SNORA43.1-201ENST00000364863 140 ntBASIC6□□□□□ -1.45
PCDH1Q08174 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDH1Q08174 RNU6-74P-201ENST00000384235 107 ntBASIC6□□□□□ -1.45
PCDH1Q08174 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 AL121835.1-201ENST00000404250 354 ntBASIC6□□□□□ -1.45
PCDH1Q08174 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PCDH1Q08174 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6□□□□□ -1.45
PCDH1Q08174 OR2B7P-201ENST00000429302 934 ntBASIC6□□□□□ -1.45
PCDH1Q08174 RPL5P25-201ENST00000441148 775 ntBASIC6□□□□□ -1.45
PCDH1Q08174 BNIP3P2-201ENST00000441221 577 ntBASIC6□□□□□ -1.45
PCDH1Q08174 GAPDHP23-201ENST00000444823 993 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AC002381.1-201ENST00000447049 280 ntBASIC6□□□□□ -1.45
PCDH1Q08174 COX4I1P2-201ENST00000447446 547 ntBASIC6□□□□□ -1.45
PCDH1Q08174 RPL23AP60-201ENST00000450011 454 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6□□□□□ -1.45
PCDH1Q08174 RPL7P22-201ENST00000466005 733 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AC044810.1-201ENST00000480271 711 ntBASIC6□□□□□ -1.45
PCDH1Q08174 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6□□□□□ -1.45
PCDH1Q08174 RPS3AP50-201ENST00000487064 803 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AC008945.1-201ENST00000505144 499 ntBASIC6□□□□□ -1.45
PCDH1Q08174 EIF3KP3-201ENST00000514461 639 ntBASIC6□□□□□ -1.45
PCDH1Q08174 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6□□□□□ -1.45
PCDH1Q08174 IGKV2-19-201ENST00000518132 283 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6□□□□□ -1.45
PCDH1Q08174 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6□□□□□ -1.45
PCDH1Q08174 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6□□□□□ -1.45
PCDH1Q08174 PDCD5P1-201ENST00000543528 309 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6□□□□□ -1.45
PCDH1Q08174 AL163952.1-202ENST00000569625 600 ntBASIC6□□□□□ -1.45
PCDH1Q08174 RPL26P30-202ENST00000602923 645 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AC115621.1-201ENST00000604653 858 ntBASIC6□□□□□ -1.45
PCDH1Q08174 MIR6889-201ENST00000613185 59 ntBASIC6□□□□□ -1.45
PCDH1Q08174 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AL603758.1-201ENST00000618654 241 ntBASIC6□□□□□ -1.45
PCDH1Q08174 AC009248.2-201ENST00000619826 254 ntBASIC6□□□□□ -1.45
PCDH1Q08174 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6□□□□□ -1.45
PCDH1Q08174 AC089999.3-201ENST00000622440 577 ntBASIC6□□□□□ -1.45
PCDH1Q08174 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6□□□□□ -1.45
PCDH1Q08174 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6□□□□□ -1.45
PCDH1Q08174 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6□□□□□ -1.45
PCDH1Q08174 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6□□□□□ -1.45
PCDH1Q08174 AC027575.3-201ENST00000583058 2747 ntBASIC6□□□□□ -1.45
PCDH1Q08174 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDH1Q08174 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6□□□□□ -1.45
PCDH1Q08174 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC011416.1-201ENST00000514947 1732 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDH1Q08174 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
PCDH1Q08174 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH1Q08174 AL049780.3-201ENST00000624612 1583 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 PPBPP2-201ENST00000513150 1362 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 SNORA20.2-201ENST00000383922 131 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 PRELID1P1-201ENST00000403549 660 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 GAPDHP42-201ENST00000406848 981 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 RN7SKP146-201ENST00000410242 334 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 RN7SKP140-201ENST00000411196 284 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC019097.1-201ENST00000424783 735 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 AC016027.5-201ENST00000427227 210 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC006335.2-201ENST00000437993 330 ntBASIC5.99□□□□□ -1.45
PCDH1Q08174 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDH1Q08174 AC234771.2-201ENST00000445718 597 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms