Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDH13P55290 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH13P55290 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH13P55290 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH13P55290 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH13P55290 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH13P55290 AC022893.2-201ENST00000564832 3296 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC111188.2-201ENST00000529697 1387 ntBASIC4.37□□□□□ -1.71
CDH13P55290 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH13P55290 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH13P55290 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH13P55290 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH13P55290 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CDH13P55290 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CDH13P55290 XPOTP1-201ENST00000443317 2398 ntBASIC4.36□□□□□ -1.71
CDH13P55290 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH13P55290 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 SDAD1P1-202ENST00000524156 2051 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC087190.4-201ENST00000574616 8334 ntBASIC4.36□□□□□ -1.71
CDH13P55290 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH13P55290 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH13P55290 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 RNU6-1151P-201ENST00000384684 107 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AL645733.1-201ENST00000402250 217 ntBASIC4.36□□□□□ -1.71
CDH13P55290 PRRC2CP1-201ENST00000404428 159 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AL078604.1-201ENST00000404609 466 ntBASIC4.36□□□□□ -1.71
CDH13P55290 VN1R8P-201ENST00000407739 893 ntBASIC4.36□□□□□ -1.71
CDH13P55290 RNU6-272P-201ENST00000411028 104 ntBASIC4.36□□□□□ -1.71
CDH13P55290 MTND4P3-201ENST00000417829 541 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC106883.1-201ENST00000418805 562 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH13P55290 AC007394.1-201ENST00000421941 531 ntBASIC4.36□□□□□ -1.71
CDH13P55290 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.36□□□□□ -1.71
CDH13P55290 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH13P55290 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 AC004865.1-201ENST00000442276 1003 ntBASIC4.36□□□□□ -1.71
CDH13P55290 RPL36AP15-201ENST00000444514 266 ntBASIC4.36□□□□□ -1.71
CDH13P55290 RPL23AP43-201ENST00000446445 471 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 AC233982.1-201ENST00000451247 436 ntBASIC4.36□□□□□ -1.71
CDH13P55290 DDX39BP2-208ENST00000453923 258 ntBASIC4.36□□□□□ -1.71
CDH13P55290 NAP1L1P3-201ENST00000462291 880 ntBASIC4.36□□□□□ -1.71
CDH13P55290 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 AC096571.1-202ENST00000506634 735 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 NDUFB5P1-201ENST00000508134 564 ntBASIC4.36□□□□□ -1.71
CDH13P55290 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH13P55290 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH13P55290 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH13P55290 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 AC022790.1-201ENST00000522872 204 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC021451.1-201ENST00000523498 1129 ntBASIC4.36□□□□□ -1.71
CDH13P55290 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CDH13P55290 LRRC6P1-201ENST00000532188 885 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH13P55290 SERPINE4P-201ENST00000554978 281 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 AC090515.3-201ENST00000560431 315 ntBASIC4.36□□□□□ -1.71
CDH13P55290 NIFKP8-201ENST00000560500 874 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC044860.2-201ENST00000561005 179 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH13P55290 AC024060.1-201ENST00000607052 494 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AC211433.2-201ENST00000608433 387 ntBASIC4.36□□□□□ -1.71
CDH13P55290 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH13P55290 MIR7155-201ENST00000615925 56 ntBASIC4.36□□□□□ -1.71
CDH13P55290 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 AC104985.3-201ENST00000623479 597 ntBASIC4.36□□□□□ -1.71
CDH13P55290 OR4G3P-201ENST00000633500 913 ntBASIC4.36□□□□□ -1.71
CDH13P55290 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH13P55290 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH13P55290 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH13P55290 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH13P55290 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH13P55290 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CDH13P55290 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
CDH13P55290 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH13P55290 AC131971.1-201ENST00000332881 1482 ntBASIC4.36□□□□□ -1.71
CDH13P55290 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
CDH13P55290 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH13P55290 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 ZNF602P-201ENST00000405929 924 ntBASIC4.35□□□□□ -1.71
CDH13P55290 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.35□□□□□ -1.71
CDH13P55290 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH13P55290 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH13P55290 AC004022.2-201ENST00000413824 193 ntBASIC4.35□□□□□ -1.71
CDH13P55290 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH13P55290 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH13P55290 RPEP2-201ENST00000432149 701 ntBASIC4.35□□□□□ -1.71
CDH13P55290 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms