Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCS2P54868 AC105918.1-201ENST00000474399 838 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 AC106707.2-201ENST00000484182 374 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
HMGCS2P54868 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS2P54868 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCS2P54868 RFPL4AP5-201ENST00000514977 504 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCS2P54868 RNU6-319P-201ENST00000516025 108 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.48□□□□□ -1.69
HMGCS2P54868 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HMGCS2P54868 SETP1-201ENST00000556014 845 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 AC027281.1-201ENST00000574178 758 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 MIR5187-201ENST00000583479 76 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.48□□□□□ -1.69
HMGCS2P54868 U3.45-201ENST00000607547 219 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 AC095038.2-201ENST00000621464 1070 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCS2P54868 HPVC1-201ENST00000629899 1198 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.48□□□□□ -1.69
HMGCS2P54868 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HMGCS2P54868 AC027290.2-201ENST00000623210 18662 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 AP001642.1-201ENST00000624727 2117 ntBASIC4.48□□□□□ -1.69
HMGCS2P54868 MAPK10-372ENST00000641954 3413 ntBASIC4.47□□□□□ -1.69
HMGCS2P54868 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCS2P54868 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCS2P54868 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HMGCS2P54868 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HMGCS2P54868 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGCS2P54868 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HMGCS2P54868 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
HMGCS2P54868 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 RN7SKP97-201ENST00000410966 333 ntBASIC4.47□□□□□ -1.69
HMGCS2P54868 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCS2P54868 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCS2P54868 AC093084.1-201ENST00000424233 687 ntBASIC4.47□□□□□ -1.69
HMGCS2P54868 ARL4AP3-201ENST00000441452 574 ntBASIC4.47□□□□□ -1.69
HMGCS2P54868 RPS3AP12-201ENST00000443616 753 ntBASIC4.47□□□□□ -1.69
HMGCS2P54868 AC018635.1-201ENST00000468292 1030 ntBASIC4.47□□□□□ -1.69
HMGCS2P54868 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCS2P54868 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCS2P54868 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCS2P54868 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCS2P54868 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.47□□□□□ -1.69
HMGCS2P54868 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.47□□□□□ -1.69
HMGCS2P54868 AL592494.3-201ENST00000609485 464 ntBASIC4.47□□□□□ -1.69
HMGCS2P54868 AC020923.1-201ENST00000624021 917 ntBASIC4.47□□□□□ -1.69
HMGCS2P54868 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
HMGCS2P54868 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.47□□□□□ -1.69
HMGCS2P54868 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HMGCS2P54868 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HMGCS2P54868 MTCO1P12-201ENST00000414273 1543 ntBASIC4.46□□□□□ -1.69
HMGCS2P54868 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.46□□□□□ -1.69
HMGCS2P54868 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.46□□□□□ -1.69
HMGCS2P54868 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
HMGCS2P54868 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGCS2P54868 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS2P54868 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS2P54868 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS2P54868 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 BTBD10P1-201ENST00000549824 1352 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HMGCS2P54868 RNA5SP51-201ENST00000364750 119 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 RNU4-7P-201ENST00000364758 141 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 RNU2-65P-201ENST00000410162 185 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGCS2P54868 TCEA1P2-201ENST00000420496 906 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCS2P54868 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCS2P54868 MTATP6P11-201ENST00000428071 670 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 AC022022.1-201ENST00000430304 178 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 HMGB1P37-201ENST00000439613 609 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 UBDP1-202ENST00000457888 382 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 AC025181.1-201ENST00000477507 416 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 RN7SL293P-201ENST00000481765 281 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCS2P54868 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.46□□□□□ -1.7
HMGCS2P54868 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 HMGN1P15-201ENST00000513870 295 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGCS2P54868 AC012414.2-201ENST00000559474 187 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.46□□□□□ -1.7
HMGCS2P54868 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 AC073111.2-201ENST00000605657 1075 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGCS2P54868 AL163152.1-201ENST00000642001 374 ntBASIC4.46□□□□□ -1.7
HMGCS2P54868 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HMGCS2P54868 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms