Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPS17P8-201ENST00000434525 335 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 ELOCP12-201ENST00000458706 328 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AC018635.1-201ENST00000468292 1030 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.58□□□□□ -1.68
LIMK1P53667 MTND3P3-201ENST00000505004 126 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AC018797.3-201ENST00000513388 1241 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AP003355.1-201ENST00000518956 587 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 HMGB1P1-201ENST00000522557 636 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.58□□□□□ -1.68
LIMK1P53667 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 AC011611.5-201ENST00000552477 578 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.58□□□□□ -1.68
LIMK1P53667 ATP5F1P7-201ENST00000567330 760 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 MIR3944-201ENST00000581277 108 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AP001180.3-201ENST00000582221 145 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.58□□□□□ -1.68
LIMK1P53667 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 AC024220.1-201ENST00000603675 484 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 BNIP3P31-201ENST00000604515 566 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 U3.53-201ENST00000628922 216 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 ATE1-AS1-202ENST00000636460 506 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.58□□□□□ -1.68
LIMK1P53667 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.58□□□□□ -1.68
LIMK1P53667 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
LIMK1P53667 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LIMK1P53667 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.58□□□□□ -1.68
LIMK1P53667 SEC63P2-201ENST00000503863 1939 ntBASIC4.58□□□□□ -1.68
LIMK1P53667 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
LIMK1P53667 MTCO1P14-201ENST00000441695 1559 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LIMK1P53667 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIMK1P53667 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIMK1P53667 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIMK1P53667 AC008549.2-201ENST00000333482 706 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 RNA5SP502-201ENST00000362694 119 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 RNU6-354P-201ENST00000383862 107 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 RNU6-761P-201ENST00000384148 107 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 RNU6-610P-201ENST00000384264 107 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 RNU6-628P-201ENST00000410675 107 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 AC004022.2-201ENST00000413824 193 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AC234782.4-201ENST00000417646 1048 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AC013429.2-201ENST00000418798 781 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.57□□□□□ -1.68
LIMK1P53667 AC073310.1-201ENST00000423226 1033 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 RPL7AP25-201ENST00000423357 805 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LIMK1P53667 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.57□□□□□ -1.68
LIMK1P53667 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AL132765.1-201ENST00000434165 553 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIMK1P53667 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.57□□□□□ -1.68
LIMK1P53667 RPL23AP93-201ENST00000440847 484 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 AC073587.1-201ENST00000447093 876 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AL096803.2-201ENST00000450032 677 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 AL691482.1-201ENST00000453255 87 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.57□□□□□ -1.68
LIMK1P53667 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LIMK1P53667 RN7SL542P-201ENST00000467147 294 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 RPL36AP41-201ENST00000493820 306 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 IGLVIV-65-201ENST00000517313 360 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.57□□□□□ -1.68
LIMK1P53667 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 SNORA74C-1-201ENST00000580726 201 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 AC097505.1-201ENST00000610199 565 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 AC004825.2-201ENST00000616634 455 ntBASIC4.57□□□□□ -1.68
LIMK1P53667 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.57□□□□□ -1.68
LIMK1P53667 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LIMK1P53667 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
LIMK1P53667 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.57□□□□□ -1.68
LIMK1P53667 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LIMK1P53667 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
LIMK1P53667 HSPA8P19-201ENST00000505359 1517 ntBASIC4.56□□□□□ -1.68
LIMK1P53667 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
LIMK1P53667 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.56□□□□□ -1.68
LIMK1P53667 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LIMK1P53667 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LIMK1P53667 AL161912.2-201ENST00000565707 3007 ntBASIC4.56□□□□□ -1.68
LIMK1P53667 AC012020.1-201ENST00000624541 1728 ntBASIC4.56□□□□□ -1.68
LIMK1P53667 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
LIMK1P53667 XIAPP3-201ENST00000312918 795 ntBASIC4.56□□□□□ -1.68
LIMK1P53667 MIR525-201ENST00000384978 85 ntBASIC4.56□□□□□ -1.68
LIMK1P53667 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LIMK1P53667 AL592291.1-201ENST00000403830 352 ntBASIC4.56□□□□□ -1.68
LIMK1P53667 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.56□□□□□ -1.68
LIMK1P53667 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.56□□□□□ -1.68
LIMK1P53667 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms