Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF144AP50876 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RNF144AP50876 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RNF144AP50876 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 RACGAP1P-201ENST00000550663 1879 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF144AP50876 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 HSPE1P11-201ENST00000339579 310 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 Y_RNA.22-201ENST00000362492 102 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 RNU1-85P-201ENST00000364127 164 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 Y_RNA.447-201ENST00000384184 113 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 ARF4P3-201ENST00000397387 509 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 RN7SKP271-201ENST00000410528 320 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 MICG-208ENST00000416822 132 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC092832.1-201ENST00000422934 400 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 GAPDHP57-201ENST00000424400 585 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 RSL24D1P6-201ENST00000426934 401 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF144AP50876 AC114495.1-201ENST00000441274 436 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF144AP50876 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 AL035090.1-201ENST00000454835 332 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF144AP50876 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF144AP50876 RN7SL149P-201ENST00000465197 281 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AL049714.1-201ENST00000466686 347 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AL355032.1-201ENST00000472981 438 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF144AP50876 AC073581.1-201ENST00000519036 575 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC022360.1-201ENST00000521058 340 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF144AP50876 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF144AP50876 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC116158.1-201ENST00000560231 2129 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 MIR4775-201ENST00000581168 75 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC020914.7-201ENST00000594477 545 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 AL359704.2-201ENST00000604335 521 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 FXYD6P1-201ENST00000604857 285 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC011890.2-201ENST00000613393 294 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC243312.2-201ENST00000623340 601 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 AC067931.1-201ENST00000624190 671 ntBASIC6.33□□□□□ -1.4
RNF144AP50876 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RNF144AP50876 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF144AP50876 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RNF144AP50876 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF144AP50876 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF144AP50876 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC032011.1-201ENST00000611703 1549 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 AL157777.2-201ENST00000258070 137 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 AL139276.1-201ENST00000311910 1001 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 Y_RNA.389-201ENST00000383924 113 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 RNA5SP176-201ENST00000390956 110 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 RNU6-1109P-201ENST00000391187 107 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 BX323014.1-201ENST00000412876 237 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF144AP50876 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF144AP50876 AC068533.1-201ENST00000418542 415 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF144AP50876 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 MTATP6P16-201ENST00000434543 526 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF144AP50876 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF144AP50876 NANOGP10-201ENST00000453325 895 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 SNRPFP3-201ENST00000457792 225 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 PPP1R11P1-201ENST00000486095 376 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 AC055855.1-201ENST00000489563 579 ntBASIC6.32□□□□□ -1.4
RNF144AP50876 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF144AP50876 AC063943.2-201ENST00000495697 534 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms