Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA11P31270 TPTE2P5-203ENST00000458118 728 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC010468.1-201ENST00000461022 817 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC091167.1-201ENST00000492017 396 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA11P31270 CYCSP29-201ENST00000533731 318 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA11P31270 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA11P31270 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.85□□□□□ -1.63
HOXA11P31270 HMGB3P26-201ENST00000560051 582 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 HNRNPCP4-201ENST00000571636 900 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 MIR4716-201ENST00000579628 84 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXA11P31270 COX6CP4-201ENST00000605798 228 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXA11P31270 AC024060.1-201ENST00000607052 494 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AL445567.2-201ENST00000618935 498 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC068831.8-201ENST00000620171 435 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC107068.1-201ENST00000563286 4218 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC099786.3-201ENST00000565735 1410 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC000374.1-201ENST00000434698 1745 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXA11P31270 AC139769.1-204ENST00000472297 1931 ntBASIC4.85□□□□□ -1.63
HOXA11P31270 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA11P31270 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXA11P31270 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HOXA11P31270 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 SNORD56.4-201ENST00000363883 71 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 RNU1-132P-201ENST00000364300 164 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.84□□□□□ -1.63
HOXA11P31270 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC011933.1-201ENST00000413334 321 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA11P31270 MTCO3P4-201ENST00000419236 787 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC004975.1-201ENST00000428733 208 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 RPL21P91-201ENST00000429231 479 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA11P31270 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA11P31270 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA11P31270 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA11P31270 NUTF2P7-201ENST00000453086 375 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AL445669.2-201ENST00000454425 421 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 CYCSP34-201ENST00000458172 304 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AC116533.1-201ENST00000459748 321 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 RPS27AP17-201ENST00000463344 455 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 SYT14P1-201ENST00000481459 721 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC069304.1-201ENST00000491593 704 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 RPL21P131-201ENST00000497298 483 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC010486.3-201ENST00000511602 785 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AC118465.1-201ENST00000513820 1271 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA11P31270 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA11P31270 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.84□□□□□ -1.63
HOXA11P31270 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC084757.1-201ENST00000559987 490 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AL109741.3-201ENST00000561748 592 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 MTCYBP28-201ENST00000566728 1132 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AC110743.1-201ENST00000584870 478 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AC068790.2-201ENST00000602601 557 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AC021171.1-201ENST00000603137 706 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AC073387.2-201ENST00000604797 784 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 AC009090.3-201ENST00000616553 565 ntBASIC4.84□□□□□ -1.63
HOXA11P31270 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HOXA11P31270 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXA11P31270 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA11P31270 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA11P31270 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
HOXA11P31270 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXA11P31270 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXA11P31270 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.64
HOXA11P31270 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HOXA11P31270 DDX18P4-201ENST00000511690 1966 ntBASIC4.84□□□□□ -1.64
HOXA11P31270 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA11P31270 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA11P31270 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.83□□□□□ -1.64
HOXA11P31270 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA11P31270 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HOXA11P31270 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
HOXA11P31270 RNA5SP366-201ENST00000365454 123 ntBASIC4.83□□□□□ -1.64
HOXA11P31270 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HOXA11P31270 FCF1P5-201ENST00000406490 482 ntBASIC4.83□□□□□ -1.64
HOXA11P31270 SNORA11F-201ENST00000408237 128 ntBASIC4.83□□□□□ -1.64
HOXA11P31270 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HOXA11P31270 EIF4A1P1-201ENST00000420241 934 ntBASIC4.83□□□□□ -1.64
HOXA11P31270 AC010099.3-201ENST00000423896 409 ntBASIC4.83□□□□□ -1.64
HOXA11P31270 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms