Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SNORA17.5-201ENST00000630429 132 ntBASIC4.84□□□□□ -1.63
EPHA3P29320 CASC19-222ENST00000641321 1173 ntBASIC4.84□□□□□ -1.63
EPHA3P29320 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EPHA3P29320 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EPHA3P29320 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EPHA3P29320 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.84□□□□□ -1.64
EPHA3P29320 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
EPHA3P29320 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
EPHA3P29320 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
EPHA3P29320 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
EPHA3P29320 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA3P29320 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC022031.1-201ENST00000585985 2593 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 NCLP2-201ENST00000416078 1462 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
EPHA3P29320 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.83□□□□□ -1.64
EPHA3P29320 AP001273.1-201ENST00000624493 3152 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 AC008549.2-201ENST00000333482 706 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
EPHA3P29320 SUGT1P1-201ENST00000379514 476 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 SNORA67-201ENST00000384423 137 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 SNORA70.10-201ENST00000384515 134 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 SNORD116-4-201ENST00000384733 96 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
EPHA3P29320 AL031985.1-201ENST00000392713 418 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AL592291.1-201ENST00000403830 352 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 RN7SKP125-201ENST00000410481 302 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA3P29320 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC007394.1-201ENST00000421941 531 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 AC104843.2-201ENST00000427666 297 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.83□□□□□ -1.64
EPHA3P29320 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 AL591363.1-201ENST00000450091 483 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 RPL23AP15-201ENST00000450202 459 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 NDUFA5P7-201ENST00000452914 242 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 DDX39BP2-208ENST00000453923 258 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 SETP20-201ENST00000457046 852 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 RPL7P1-201ENST00000468161 747 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 RPL7P9-201ENST00000468715 747 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
EPHA3P29320 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA3P29320 PPIAP19-201ENST00000486414 492 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC104109.1-201ENST00000498563 436 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC104685.1-201ENST00000502445 371 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 MTCYBP37-201ENST00000510642 1133 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
EPHA3P29320 RPS27AP18-201ENST00000515536 459 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 RNU6-202P-201ENST00000515998 96 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 RNY4P37-201ENST00000516225 96 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 IGKV3D-34-201ENST00000522638 302 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA3P29320 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC027026.1-201ENST00000532323 742 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC027544.3-201ENST00000535082 757 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC007115.1-201ENST00000546853 234 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC024909.2-201ENST00000553035 286 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC007954.1-201ENST00000554198 494 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 TRAV15-201ENST00000556680 249 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA3P29320 AC068790.2-201ENST00000602601 557 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 WISP1-OT1-201ENST00000602893 642 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC104695.2-201ENST00000605056 775 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC112220.3-201ENST00000605502 502 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC006270.3-201ENST00000605967 1036 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AL354760.1-201ENST00000608357 643 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC092653.1-201ENST00000608509 531 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AC127024.6-201ENST00000621598 424 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.83□□□□□ -1.64
EPHA3P29320 MIR4302-201ENST00000638058 60 ntBASIC4.83□□□□□ -1.64
EPHA3P29320 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.83□□□□□ -1.64
EPHA3P29320 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
EPHA3P29320 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.83□□□□□ -1.64
EPHA3P29320 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
EPHA3P29320 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
EPHA3P29320 ZNF833P-201ENST00000424938 1494 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms