Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PTENP1-201ENST00000447117 1215 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 BX276092.4-201ENST00000452056 248 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC093166.2-201ENST00000455969 1017 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 RN7SL610P-201ENST00000463845 291 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC087385.1-201ENST00000475062 312 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 RN7SL826P-201ENST00000479724 288 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.56□□□□□ -1.68
ABCD3P28288 MTND4LP2-201ENST00000502312 285 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.56□□□□□ -1.68
ABCD3P28288 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.56□□□□□ -1.68
ABCD3P28288 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.56□□□□□ -1.68
ABCD3P28288 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 NDUFB5P1-201ENST00000508134 564 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 SNORA48.10-201ENST00000516965 160 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 RN7SKP234-201ENST00000517173 224 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.56□□□□□ -1.68
ABCD3P28288 AC105031.1-201ENST00000518550 476 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.56□□□□□ -1.68
ABCD3P28288 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.56□□□□□ -1.68
ABCD3P28288 AC008033.2-201ENST00000542626 177 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC023050.2-201ENST00000544968 387 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 AGGF1P8-201ENST00000562979 1000 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.56□□□□□ -1.68
ABCD3P28288 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 GAS5-AS1-201ENST00000602767 694 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AC098935.2-201ENST00000604222 466 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 HSPE1P14-201ENST00000605812 302 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AP003117.2-201ENST00000606010 545 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 AP002782.1-201ENST00000623107 614 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 AP000770.2-201ENST00000623694 100 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 AC099654.2-201ENST00000433031 1980 ntBASIC4.56□□□□□ -1.68
ABCD3P28288 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.56□□□□□ -1.68
ABCD3P28288 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ABCD3P28288 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.56□□□□□ -1.68
ABCD3P28288 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ABCD3P28288 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ABCD3P28288 AL022393.1-201ENST00000625142 1677 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.55□□□□□ -1.68
ABCD3P28288 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
ABCD3P28288 Y_RNA.465-201ENST00000384293 102 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 RPL23AP47-201ENST00000408017 460 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 SNORA11B-201ENST00000408175 129 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 RPL31P2-201ENST00000413849 377 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 QRSL1P2-201ENST00000418582 964 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 OR2AM1P-201ENST00000422137 422 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 XKRYP1-201ENST00000423438 492 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.55□□□□□ -1.68
ABCD3P28288 XKRYP2-201ENST00000432915 492 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.55□□□□□ -1.68
ABCD3P28288 RPL12P3-201ENST00000440080 396 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC112498.1-201ENST00000444401 332 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCD3P28288 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.55□□□□□ -1.68
ABCD3P28288 AC073073.1-201ENST00000493920 463 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC104971.1-201ENST00000495117 578 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCD3P28288 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCD3P28288 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.55□□□□□ -1.68
ABCD3P28288 RN7SKP277-201ENST00000516895 283 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC090819.1-201ENST00000523800 1111 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCD3P28288 AP000790.1-201ENST00000528891 737 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC005832.3-201ENST00000537929 631 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ABCD3P28288 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.55□□□□□ -1.68
ABCD3P28288 LSM6P2-201ENST00000552208 177 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC011840.5-201ENST00000582125 771 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 AC113368.1-201ENST00000603736 382 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC104687.2-201ENST00000604442 342 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC010680.4-201ENST00000605334 543 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC007349.4-201ENST00000608114 532 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AP001521.2-201ENST00000608772 546 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC105429.2-201ENST00000610567 517 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 AC109809.1-201ENST00000619665 545 ntBASIC4.55□□□□□ -1.68
ABCD3P28288 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.55□□□□□ -1.68
ABCD3P28288 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ABCD3P28288 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms