Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 WBP1LP1-201ENST00000460451 896 ntBASIC8.22□□□□□ -1.09
CD44P16070 AC008026.1-201ENST00000460492 447 ntBASIC8.22□□□□□ -1.09
CD44P16070 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC8.22□□□□□ -1.09
CD44P16070 IGLV10-67-201ENST00000519446 325 ntBASIC8.22□□□□□ -1.09
CD44P16070 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.22□□□□□ -1.09
CD44P16070 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.22□□□□□ -1.09
CD44P16070 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC8.22□□□□□ -1.09
CD44P16070 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC8.22□□□□□ -1.09
CD44P16070 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.22□□□□□ -1.09
CD44P16070 MIR3689F-201ENST00000579617 66 ntBASIC8.22□□□□□ -1.09
CD44P16070 COX6CP3-201ENST00000580869 223 ntBASIC8.22□□□□□ -1.09
CD44P16070 AL121917.1-203ENST00000605534 577 ntBASIC8.22□□□□□ -1.09
CD44P16070 MIR6129-201ENST00000616087 109 ntBASIC8.22□□□□□ -1.09
CD44P16070 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.22□□□□□ -1.09
CD44P16070 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.21□□□□□ -1.09
CD44P16070 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
CD44P16070 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC8.21□□□□□ -1.09
CD44P16070 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC8.21□□□□□ -1.09
CD44P16070 AL138713.1-201ENST00000624026 2130 ntBASIC8.21□□□□□ -1.09
CD44P16070 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CD44P16070 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CD44P16070 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CD44P16070 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CD44P16070 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.21□□□□□ -1.09
CD44P16070 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.21□□□□□ -1.09
CD44P16070 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
CD44P16070 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CD44P16070 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CD44P16070 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC8.21□□□□□ -1.09
CD44P16070 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.21□□□□□ -1.1
CD44P16070 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 RNA5SP18-201ENST00000390935 121 ntBASIC8.21□□□□□ -1.1
CD44P16070 AC133644.1-201ENST00000398171 937 ntBASIC8.21□□□□□ -1.1
CD44P16070 SNX18P14-201ENST00000429308 574 ntBASIC8.21□□□□□ -1.1
CD44P16070 NIP7P1-201ENST00000433227 512 ntBASIC8.21□□□□□ -1.1
CD44P16070 BX679664.1-201ENST00000434429 253 ntBASIC8.21□□□□□ -1.1
CD44P16070 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.21□□□□□ -1.1
CD44P16070 RN7SL233P-201ENST00000469988 277 ntBASIC8.21□□□□□ -1.1
CD44P16070 AC084878.1-201ENST00000480555 648 ntBASIC8.21□□□□□ -1.1
CD44P16070 RPL34P29-201ENST00000491411 325 ntBASIC8.21□□□□□ -1.1
CD44P16070 RPS17P5-201ENST00000498293 408 ntBASIC8.21□□□□□ -1.1
CD44P16070 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 AC006070.1-201ENST00000508151 193 ntBASIC8.21□□□□□ -1.1
CD44P16070 AC007016.1-201ENST00000512110 244 ntBASIC8.21□□□□□ -1.1
CD44P16070 RNU6-202P-201ENST00000515998 96 ntBASIC8.21□□□□□ -1.1
CD44P16070 AC112191.2-201ENST00000522428 333 ntBASIC8.21□□□□□ -1.1
CD44P16070 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 OR7E87P-201ENST00000532397 929 ntBASIC8.21□□□□□ -1.1
CD44P16070 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.21□□□□□ -1.1
CD44P16070 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC8.21□□□□□ -1.1
CD44P16070 TGIF1P1-201ENST00000558095 802 ntBASIC8.21□□□□□ -1.1
CD44P16070 MIR5701-3-201ENST00000578890 82 ntBASIC8.21□□□□□ -1.1
CD44P16070 MIR548X2-201ENST00000579776 100 ntBASIC8.21□□□□□ -1.1
CD44P16070 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 MIR5701-1-201ENST00000585138 82 ntBASIC8.21□□□□□ -1.1
CD44P16070 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC8.21□□□□□ -1.1
CD44P16070 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC8.21□□□□□ -1.1
CD44P16070 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.21□□□□□ -1.1
CD44P16070 MIR5701-2-201ENST00000615634 82 ntBASIC8.21□□□□□ -1.1
CD44P16070 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
CD44P16070 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
CD44P16070 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CD44P16070 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
CD44P16070 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
CD44P16070 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.21□□□□□ -1.1
CD44P16070 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.21□□□□□ -1.1
CD44P16070 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.21□□□□□ -1.1
CD44P16070 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC8.21□□□□□ -1.1
CD44P16070 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.21□□□□□ -1.1
CD44P16070 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 AL137003.2-201ENST00000606924 2538 ntBASIC8.21□□□□□ -1.1
CD44P16070 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CD44P16070 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC8.2□□□□□ -1.1
CD44P16070 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.2□□□□□ -1.1
CD44P16070 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CD44P16070 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.2□□□□□ -1.1
CD44P16070 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms