Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNVU1-4-201ENST00000612985 164 ntBASIC4.3□□□□□ -1.72
TPM1P09493 ATE1-AS1-202ENST00000636460 506 ntBASIC4.3□□□□□ -1.72
TPM1P09493 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.3□□□□□ -1.72
TPM1P09493 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TPM1P09493 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.3□□□□□ -1.72
TPM1P09493 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM1P09493 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TPM1P09493 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TPM1P09493 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM1P09493 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM1P09493 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM1P09493 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM1P09493 RPL37P18-201ENST00000411602 243 ntBASIC4.29□□□□□ -1.72
TPM1P09493 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.29□□□□□ -1.72
TPM1P09493 AL139128.1-201ENST00000413921 941 ntBASIC4.29□□□□□ -1.72
TPM1P09493 AL590139.1-201ENST00000416267 400 ntBASIC4.29□□□□□ -1.72
TPM1P09493 CNOT7P1-201ENST00000429006 852 ntBASIC4.29□□□□□ -1.72
TPM1P09493 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM1P09493 RANP8-201ENST00000444720 713 ntBASIC4.29□□□□□ -1.72
TPM1P09493 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM1P09493 RPL7P47-201ENST00000497299 556 ntBASIC4.29□□□□□ -1.72
TPM1P09493 AC093720.1-201ENST00000505681 714 ntBASIC4.29□□□□□ -1.72
TPM1P09493 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM1P09493 FTH1P9-201ENST00000513251 355 ntBASIC4.29□□□□□ -1.72
TPM1P09493 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM1P09493 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM1P09493 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM1P09493 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM1P09493 SS18L2P2-201ENST00000583960 235 ntBASIC4.29□□□□□ -1.72
TPM1P09493 AL592295.2-201ENST00000612578 206 ntBASIC4.29□□□□□ -1.72
TPM1P09493 MIR7151-201ENST00000617477 60 ntBASIC4.29□□□□□ -1.72
TPM1P09493 MIR6719-201ENST00000622428 87 ntBASIC4.29□□□□□ -1.72
TPM1P09493 C2orf27A-204ENST00000623058 969 ntBASIC4.29□□□□□ -1.72
TPM1P09493 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.29□□□□□ -1.72
TPM1P09493 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
TPM1P09493 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TPM1P09493 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TPM1P09493 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM1P09493 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TPM1P09493 MFSD8-216ENST00000641147 4009 ntBASIC4.28□□□□□ -1.72
TPM1P09493 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TPM1P09493 DCAF13P3-201ENST00000561147 1334 ntBASIC4.28□□□□□ -1.72
TPM1P09493 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TPM1P09493 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TPM1P09493 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM1P09493 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TPM1P09493 MIR383-201ENST00000362257 73 ntBASIC4.28□□□□□ -1.72
TPM1P09493 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.28□□□□□ -1.72
TPM1P09493 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
TPM1P09493 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TPM1P09493 AL161909.1-201ENST00000397390 712 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TPM1P09493 HMGB1P32-201ENST00000425971 565 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AL732292.1-201ENST00000426692 226 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM1P09493 AC083863.1-201ENST00000438811 231 ntBASIC4.28□□□□□ -1.72
TPM1P09493 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM1P09493 RPS17P13-201ENST00000448974 407 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM1P09493 RN7SL303P-201ENST00000469773 251 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AC087385.1-201ENST00000475062 312 ntBASIC4.28□□□□□ -1.72
TPM1P09493 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TPM1P09493 RN7SL826P-201ENST00000479724 288 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM1P09493 AC108475.1-201ENST00000507880 950 ntBASIC4.28□□□□□ -1.72
TPM1P09493 RN7SKP83-201ENST00000516512 178 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM1P09493 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM1P09493 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM1P09493 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TPM1P09493 OR4A12P-201ENST00000530847 918 ntBASIC4.28□□□□□ -1.72
TPM1P09493 OR4C2P-201ENST00000530855 1064 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM1P09493 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM1P09493 MIR4715-201ENST00000584117 79 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AC013244.1-201ENST00000604279 193 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AC006946.3-201ENST00000609791 756 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AC099669.2-201ENST00000616549 437 ntBASIC4.28□□□□□ -1.72
TPM1P09493 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM1P09493 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM1P09493 AC004943.3-201ENST00000624116 600 ntBASIC4.28□□□□□ -1.72
TPM1P09493 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TPM1P09493 AP002001.2-201ENST00000529025 1469 ntBASIC4.28□□□□□ -1.72
TPM1P09493 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM1P09493 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
TPM1P09493 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.27□□□□□ -1.73
TPM1P09493 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
TPM1P09493 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM1P09493 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TPM1P09493 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TPM1P09493 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM1P09493 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM1P09493 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM1P09493 AC025125.1-201ENST00000624743 1922 ntBASIC4.27□□□□□ -1.73
TPM1P09493 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.27□□□□□ -1.73
TPM1P09493 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
TPM1P09493 RNU6-666P-201ENST00000363499 107 ntBASIC4.27□□□□□ -1.73
TPM1P09493 RNA5SP366-201ENST00000365454 123 ntBASIC4.27□□□□□ -1.73
TPM1P09493 MIR124-3-201ENST00000384866 87 ntBASIC4.27□□□□□ -1.73
TPM1P09493 AL133270.1-201ENST00000402635 279 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms