Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HCN1O60741 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.96□□□□□ -1.78
HCN1O60741 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.95□□□□□ -1.78
HCN1O60741 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.95□□□□□ -1.78
HCN1O60741 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.95□□□□□ -1.78
HCN1O60741 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.95□□□□□ -1.78
HCN1O60741 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HCN1O60741 SNORD115-48-201ENST00000364764 76 ntBASIC3.95□□□□□ -1.78
HCN1O60741 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.95□□□□□ -1.78
HCN1O60741 RNA5SP306-201ENST00000411087 107 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC010385.1-201ENST00000412374 256 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.95□□□□□ -1.78
HCN1O60741 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 AC004975.1-201ENST00000428733 208 ntBASIC3.95□□□□□ -1.78
HCN1O60741 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 ZNF965P-201ENST00000432501 817 ntBASIC3.95□□□□□ -1.78
HCN1O60741 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 AL512326.1-201ENST00000443050 721 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.95□□□□□ -1.78
HCN1O60741 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 RPL23AP71-201ENST00000470966 469 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC105137.1-201ENST00000484355 562 ntBASIC3.95□□□□□ -1.78
HCN1O60741 RPL35P6-201ENST00000490024 372 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC010374.1-201ENST00000503762 1237 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC098799.1-201ENST00000504752 800 ntBASIC3.95□□□□□ -1.78
HCN1O60741 ATP1B1P1-201ENST00000509767 915 ntBASIC3.95□□□□□ -1.78
HCN1O60741 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 MRPL49P2-201ENST00000521066 465 ntBASIC3.95□□□□□ -1.78
HCN1O60741 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HCN1O60741 AL360157.1-201ENST00000565962 87 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.95□□□□□ -1.78
HCN1O60741 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN1O60741 AL021368.1-201ENST00000607490 540 ntBASIC3.95□□□□□ -1.78
HCN1O60741 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.95□□□□□ -1.78
HCN1O60741 AC116563.2-201ENST00000624751 535 ntBASIC3.95□□□□□ -1.78
HCN1O60741 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HCN1O60741 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HCN1O60741 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HCN1O60741 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HCN1O60741 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HCN1O60741 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
HCN1O60741 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 MTCO1P14-201ENST00000441695 1559 ntBASIC3.94□□□□□ -1.78
HCN1O60741 AC005261.4-201ENST00000600047 1385 ntBASIC3.94□□□□□ -1.78
HCN1O60741 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HCN1O60741 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.94□□□□□ -1.78
HCN1O60741 MIR383-201ENST00000362257 73 ntBASIC3.94□□□□□ -1.78
HCN1O60741 RNA5SP175-201ENST00000364275 119 ntBASIC3.94□□□□□ -1.78
HCN1O60741 RNU1-132P-201ENST00000364300 164 ntBASIC3.94□□□□□ -1.78
HCN1O60741 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HCN1O60741 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HCN1O60741 RNA5SP498-201ENST00000411342 120 ntBASIC3.94□□□□□ -1.78
HCN1O60741 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN1O60741 AL161631.1-201ENST00000417933 486 ntBASIC3.94□□□□□ -1.78
HCN1O60741 AL139095.3-201ENST00000419672 1203 ntBASIC3.94□□□□□ -1.78
HCN1O60741 EIF1P3-201ENST00000423841 334 ntBASIC3.94□□□□□ -1.78
HCN1O60741 FAR1P1-201ENST00000427163 934 ntBASIC3.94□□□□□ -1.78
HCN1O60741 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN1O60741 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN1O60741 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN1O60741 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN1O60741 RPL7P48-201ENST00000461513 746 ntBASIC3.94□□□□□ -1.78
HCN1O60741 AC146944.2-203ENST00000502493 354 ntBASIC3.94□□□□□ -1.78
HCN1O60741 AL592156.1-201ENST00000508758 304 ntBASIC3.94□□□□□ -1.78
HCN1O60741 AC139495.1-202ENST00000513164 354 ntBASIC3.94□□□□□ -1.78
HCN1O60741 SNORA31.9-201ENST00000516429 84 ntBASIC3.94□□□□□ -1.78
HCN1O60741 MIR2116-201ENST00000517221 80 ntBASIC3.94□□□□□ -1.78
HCN1O60741 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.94□□□□□ -1.78
HCN1O60741 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.94□□□□□ -1.78
HCN1O60741 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.94□□□□□ -1.78
HCN1O60741 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.94□□□□□ -1.78
HCN1O60741 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.94□□□□□ -1.78
HCN1O60741 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN1O60741 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN1O60741 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.94□□□□□ -1.78
HCN1O60741 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HCN1O60741 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 AL021997.2-201ENST00000615674 271 ntBASIC3.94□□□□□ -1.78
HCN1O60741 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 AP004607.9-201ENST00000618202 316 ntBASIC3.94□□□□□ -1.78
HCN1O60741 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HCN1O60741 AC007342.8-201ENST00000623278 678 ntBASIC3.94□□□□□ -1.78
HCN1O60741 AP003072.4-201ENST00000624580 310 ntBASIC3.94□□□□□ -1.78
HCN1O60741 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 FP325313.1-201ENST00000638228 703 ntBASIC3.94□□□□□ -1.78
HCN1O60741 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.94□□□□□ -1.78
HCN1O60741 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HCN1O60741 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HCN1O60741 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms