Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 AP000619.3-201ENST00000535634 1127 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 GCSHP4-201ENST00000538792 439 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXN3O00409 AL031281.1-201ENST00000604049 488 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AL133507.1-201ENST00000605269 557 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AL021707.7-201ENST00000607991 416 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AC090246.1-201ENST00000616499 426 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AC012414.7-202ENST00000622705 1090 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 AC026422.1-201ENST00000623961 452 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 MIR1322-201ENST00000638013 71 ntBASIC5.19□□□□□ -1.58
FOXN3O00409 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXN3O00409 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXN3O00409 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXN3O00409 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXN3O00409 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXN3O00409 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXN3O00409 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
FOXN3O00409 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXN3O00409 AC083843.3-201ENST00000623679 2186 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
FOXN3O00409 CYP1D1P-201ENST00000416662 1433 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
FOXN3O00409 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
FOXN3O00409 RNU6-492P-201ENST00000363035 104 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 RNA5SP123-201ENST00000363244 119 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 SNORD116-23-201ENST00000384645 92 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 HNRNPDP2-201ENST00000406475 478 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 U3.35-201ENST00000408405 208 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 CHEK2P3-201ENST00000416118 248 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 BOLA3P4-201ENST00000418151 400 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 RPL36AP10-201ENST00000421785 322 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AL451139.1-201ENST00000434718 346 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC004938.1-201ENST00000438468 308 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXN3O00409 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 OR6K5P-201ENST00000447050 945 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 IFNWP4-201ENST00000453148 294 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 RFC5P1-201ENST00000454419 874 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 AC010307.1-201ENST00000467206 836 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 NDUFA5P9-201ENST00000472609 340 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 MTND6P6-201ENST00000478031 263 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC020890.1-201ENST00000491837 504 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC010486.2-201ENST00000505572 483 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 AC110775.1-201ENST00000513721 462 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 RNU6-1225P-201ENST00000516336 65 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.18□□□□□ -1.58
FOXN3O00409 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
FOXN3O00409 IGLV2-28-201ENST00000520681 304 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 AP000926.4-201ENST00000527351 454 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 MTND2P26-201ENST00000528255 1029 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AP003461.1-201ENST00000528866 78 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 AC005832.3-201ENST00000537929 631 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 FKBP1BP1-201ENST00000553366 325 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 AGGF1P6-201ENST00000569213 976 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 MIR4472-2-201ENST00000582069 67 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.18□□□□□ -1.58
FOXN3O00409 AC020910.3-201ENST00000603701 874 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AL121932.1-201ENST00000605542 214 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AL445222.1-201ENST00000607259 628 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 MIR8069-1-201ENST00000616627 86 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC016769.4-201ENST00000616893 535 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 MIR8069-2-201ENST00000621412 86 ntBASIC5.18□□□□□ -1.58
FOXN3O00409 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.18□□□□□ -1.58
FOXN3O00409 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.18□□□□□ -1.58
FOXN3O00409 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXN3O00409 AC074029.4-201ENST00000624796 1859 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 AL672167.1-205ENST00000641112 3080 ntBASIC5.17□□□□□ -1.58
FOXN3O00409 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
FOXN3O00409 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms