Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 MIR4458-201ENST00000578872 75 ntBASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 RN7SL600P-201ENST00000581811 299 ntBASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 AP000255.1-201ENST00000610276 676 ntBASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 AC095038.2-201ENST00000621464 1070 ntBASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 C2orf27A-204ENST00000623058 969 ntBASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 MIR6830-201ENST00000636015 70 ntBASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DRB4X5D2U9 CEP170P1-201ENST00000502249 4587 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RPL32P3-201ENST00000359025 275 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 SNORA62-201ENST00000365493 153 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AL049693.1-201ENST00000402760 611 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RPL7AP73-201ENST00000413490 353 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RCC2P2-201ENST00000422174 918 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 C4BPAP2-201ENST00000428434 478 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 HIGD1AP4-201ENST00000430194 280 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 TPT1P12-201ENST00000448968 492 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RPL7AP52-201ENST00000458096 790 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RPL7P19-201ENST00000469948 618 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RN7SL860P-201ENST00000473738 223 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AL132838.2-201ENST00000492041 314 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 NDUFB4P9-201ENST00000511646 388 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 IGKV2D-10-201ENST00000520194 281 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC091516.1-201ENST00000549191 703 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AL049634.3-201ENST00000604968 457 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RNVU1-4-201ENST00000612985 164 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AL591424.2-201ENST00000617023 128 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AL139089.1-201ENST00000620372 975 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 MIR6758-201ENST00000620653 63 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 AC124312.6-202ENST00000623624 418 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 MIR492-201ENST00000638676 116 ntBASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
HLA-DRB4X5D2U9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 CASC19-261ENST00000641853 1638 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AL139811.1-201ENST00000424779 2299 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AC126755.2-208ENST00000327792 462 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AC138969.1-213ENST00000331436 462 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 RNA5SP130-201ENST00000364431 114 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 U3.15-201ENST00000365398 212 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 RNA5SP105-201ENST00000391123 113 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AC073464.3-201ENST00000422564 712 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 RPL23AP14-201ENST00000468281 468 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AC018635.1-201ENST00000468292 1030 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 AC007537.2-201ENST00000472093 511 ntBASIC2.97□□□□□ -1.93
HLA-DRB4X5D2U9 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms