Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC010374.1-201ENST00000503762 1237 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC025459.1-201ENST00000504072 156 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC008958.1-201ENST00000511047 682 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 RNA5SP315-201ENST00000516340 116 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 snoU109.6-201ENST00000516831 118 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 RNA5SP312-201ENST00000517068 116 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 HIGD1AP18-201ENST00000520730 278 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AP003066.2-201ENST00000529375 555 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 SUMO2P14-201ENST00000604488 293 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AL591034.3-201ENST00000605511 685 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC016597.2-201ENST00000613256 341 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AL356274.1-201ENST00000617064 410 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 MIR7154-201ENST00000620673 73 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC023510.2-201ENST00000622162 746 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC090772.4-201ENST00000623599 362 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC099654.8-201ENST00000637757 681 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 AC007342.7-201ENST00000624610 2337 ntBASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.28□□□□□ -1.72
CSNK1G3Q9Y6M4 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 NXPH1-205ENST00000602349 1953 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC008432.1-201ENST00000615912 1320 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 RNU1-64P-201ENST00000365443 163 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 RNU6-354P-201ENST00000383862 107 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 RNU6-610P-201ENST00000384264 107 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 RNU1-13P-201ENST00000384499 162 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 HMGB1P10-201ENST00000395823 563 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 COX6CP15-201ENST00000426313 211 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC013262.1-201ENST00000426710 252 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 FO393414.1-201ENST00000428697 1184 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 RPL21P91-201ENST00000429231 479 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 PPIAP13-201ENST00000434706 478 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 MTCYBP12-201ENST00000440559 1134 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 RPS27P5-201ENST00000444247 244 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 APOOP2-201ENST00000461561 539 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC008379.1-201ENST00000463655 464 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 RN7SL691P-201ENST00000494487 301 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AL592156.1-201ENST00000508758 304 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 PGBD4P4-201ENST00000509673 613 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 MTND6P33-201ENST00000571794 183 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC090666.1-201ENST00000578241 445 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC008638.3-201ENST00000603341 463 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AL109618.2-201ENST00000605527 211 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 FAM27D1-201ENST00000612308 341 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC008759.3-201ENST00000613300 508 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC022960.3-201ENST00000619794 441 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC007275.1-201ENST00000621243 671 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 MIR4727-201ENST00000622232 55 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AC010608.3-201ENST00000625048 527 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AL445984.1-201ENST00000637834 659 ntBASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CSNK1G3Q9Y6M4 AL645568.2-201ENST00000432815 1337 ntBASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 RNA5SP175-201ENST00000364275 119 ntBASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 RNU6-244P-201ENST00000391028 104 ntBASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 AL161909.1-201ENST00000397390 712 ntBASIC4.26□□□□□ -1.73
CSNK1G3Q9Y6M4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms