Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC083923.1-201ENST00000523708 376 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 C1DP5-201ENST00000525775 383 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC106734.1-201ENST00000568646 663 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AP001160.4-201ENST00000596971 382 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 BNIP3P19-201ENST00000605397 577 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC026979.4-201ENST00000606555 645 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC015804.1-201ENST00000622935 435 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC017104.5-201ENST00000637647 639 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC009452.1-201ENST00000640823 606 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.4□□□□□ -1.7
PCDHGA1Q9Y5H4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.4□□□□□ -1.7
PCDHGA1Q9Y5H4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AL512646.1-201ENST00000269395 1077 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 MIR16-2-201ENST00000362117 81 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 RN7SKP280-201ENST00000364196 304 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL32P23-201ENST00000397237 405 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AL022722.2-201ENST00000402519 180 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AP000580.1-201ENST00000404439 358 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 RPS26P40-201ENST00000435209 294 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL23AP93-201ENST00000440847 484 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC092809.1-201ENST00000441469 474 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 Z95327.1-201ENST00000446082 482 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 BTF3P6-201ENST00000448054 499 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 CYCSP20-201ENST00000473154 315 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 S100A11P1-201ENST00000477525 312 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 RN7SL604P-201ENST00000492589 296 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC020593.1-201ENST00000507399 299 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 HMGB3P16-201ENST00000508037 287 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 OR8R1P-201ENST00000543943 764 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 ATP5F1P7-201ENST00000567330 760 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC034105.4-201ENST00000568304 277 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC245389.1-201ENST00000605141 529 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC005014.3-201ENST00000605985 190 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC253576.2-201ENST00000618815 580 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 LINC01808-202ENST00000641680 1116 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 OR11H5P-202ENST00000641612 1325 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 XPOTP1-201ENST00000443317 2398 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AC017104.4-201ENST00000636283 1592 ntBASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA1Q9Y5H4 ZNF33CP-201ENST00000432492 2030 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC135352.1-201ENST00000506173 1418 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 RNU6-1339P-201ENST00000363574 91 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AL359837.1-201ENST00000381357 287 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 RNU1-13P-201ENST00000384499 162 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 MIR659-201ENST00000384963 97 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 PPIAP31-201ENST00000405422 495 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 HMGB3P18-201ENST00000406327 590 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 RPL36AP10-201ENST00000421785 322 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AL512637.2-201ENST00000431287 1256 ntBASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHGA1Q9Y5H4 OR4C10P-201ENST00000434991 931 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms