Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SNORA19.2-201ENST00000516013 114 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 IGHV3-57-201ENST00000520143 280 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 TPM3P3-201ENST00000521343 354 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC093012.1-202ENST00000549403 582 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 HMGN2P6-201ENST00000551091 273 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC020661.2-201ENST00000560114 134 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AC068790.5-201ENST00000602741 355 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AL683813.2-201ENST00000605245 502 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 FAM27E4-201ENST00000605259 342 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 AL008723.3-201ENST00000608926 449 ntBASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.4□□□□□ -1.22
ZC3H4Q9UPT8 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
ZC3H4Q9UPT8 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
ZC3H4Q9UPT8 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
ZC3H4Q9UPT8 LINC00561-201ENST00000565815 2738 ntBASIC7.4□□□□□ -1.23
ZC3H4Q9UPT8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
ZC3H4Q9UPT8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
ZC3H4Q9UPT8 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.4□□□□□ -1.23
ZC3H4Q9UPT8 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
ZC3H4Q9UPT8 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC025574.1-201ENST00000554784 1653 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 RNU6-769P-201ENST00000384407 104 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC068050.1-201ENST00000394891 380 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 RNU4-64P-201ENST00000410795 131 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 RNU6-272P-201ENST00000411028 104 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC004987.3-201ENST00000413879 771 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 MRPL50P2-201ENST00000416821 482 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 OR2B7P-201ENST00000429302 934 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 RPL12P3-201ENST00000440080 396 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC114728.1-201ENST00000488289 483 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AP003181.2-201ENST00000528941 181 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC090751.1-201ENST00000566966 267 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC011497.2-201ENST00000600255 639 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AL512329.2-201ENST00000607350 548 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 Mico1.1-201ENST00000611698 204 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC040896.1-201ENST00000613819 479 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AC096861.1-201ENST00000616652 240 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 MIR6837-201ENST00000620884 64 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 AL359976.1-201ENST00000418655 3528 ntBASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.39□□□□□ -1.23
ZC3H4Q9UPT8 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 OR2M1P-201ENST00000318104 951 ntBASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 SNORA32.2-201ENST00000384049 122 ntBASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 MIR506-201ENST00000384998 124 ntBASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 AL162578.1-201ENST00000406202 378 ntBASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 TXNP7-201ENST00000406296 293 ntBASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 MIR1305-201ENST00000408300 86 ntBASIC7.38□□□□□ -1.23
ZC3H4Q9UPT8 RN7SKP32-201ENST00000410167 303 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms