Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL139286.1-201ENST00000604465 483 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 AC078899.5-201ENST00000612475 178 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 MIR7151-201ENST00000617477 60 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 MIR6875-201ENST00000617506 72 ntBASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLIP2Q9UDT6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CLIP2Q9UDT6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 RNU1-64P-201ENST00000365443 163 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC083799.1-201ENST00000366451 910 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AP000357.1-201ENST00000409926 1165 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 TRGV6-201ENST00000417928 299 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC115285.1-201ENST00000424879 736 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 MTCO3P21-201ENST00000430791 643 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC063950.1-201ENST00000552036 308 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC022916.3-201ENST00000592961 742 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC099676.1-201ENST00000608886 657 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AL161637.1-201ENST00000622380 412 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC138907.10-201ENST00000623708 983 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC008785.1-201ENST00000624475 456 ntBASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLIP2Q9UDT6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 AC018555.1-201ENST00000567548 1980 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 RN7SKP44-201ENST00000363602 316 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 GSTA12P-201ENST00000402398 508 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 HSPE1P12-201ENST00000412576 301 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 RNF19BPX-201ENST00000426224 625 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 ARL4AP4-201ENST00000434170 518 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 CDC27P1-201ENST00000445384 715 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 RPL38P1-201ENST00000460914 211 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 RPL5P13-201ENST00000462840 709 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 ACTR6P1-201ENST00000514311 1104 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 SMARCE1P4-201ENST00000523647 241 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 AC067805.1-201ENST00000559344 470 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 AC079791.1-201ENST00000605356 973 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 AC107308.1-201ENST00000615897 301 ntBASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLIP2Q9UDT6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC093311.1-201ENST00000506586 2021 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 RPL32P23-201ENST00000397237 405 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 RNU4-6P-201ENST00000410804 122 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 OR8F1P-201ENST00000425243 930 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 RPL23AP89-201ENST00000439324 255 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 RPS4XP4-201ENST00000443195 763 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 RPL7P1-201ENST00000468161 747 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 RPL7P9-201ENST00000468715 747 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 TPT1P3-201ENST00000492841 512 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 AC021146.7-201ENST00000509604 775 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 KRT19P6-201ENST00000510983 209 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 FTH1P21-201ENST00000512179 511 ntBASIC4.81□□□□□ -1.64
CLIP2Q9UDT6 SNORA48.9-201ENST00000516419 162 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms