Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL606537.1-201ENST00000607258 2011 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC002075.2-201ENST00000425207 252 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 RPL7P4-203ENST00000430239 730 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 RPL37P1-201ENST00000432310 284 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AL133477.1-201ENST00000457472 514 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC099560.2-201ENST00000457554 255 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 RNU6-1334P-201ENST00000516032 105 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC090281.1-201ENST00000523019 276 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC88CQ9P219 AC073530.2-201ENST00000623987 261 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.61□□□□□ -1.83
CCDC88CQ9P219 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AL121877.1-201ENST00000453704 622 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 VWA8P1-201ENST00000510889 176 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 RN7SKP18-201ENST00000516005 275 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 MTND1P6-201ENST00000523621 946 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AL137072.1-201ENST00000603444 466 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC016957.2-201ENST00000616998 848 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 RPL21P10-201ENST00000463521 490 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 RPL7L1P8-201ENST00000469911 741 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC006511.1-201ENST00000470614 315 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.6□□□□□ -1.83
CCDC88CQ9P219 MIR3651-201ENST00000630427 90 ntBASIC3.6□□□□□ -1.83
CCDC88CQ9P219 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 RPL23AP48-201ENST00000406913 488 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 UBE2CP3-201ENST00000502715 450 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 RN7SKP13-201ENST00000515933 244 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.59□□□□□ -1.83
CCDC88CQ9P219 CCDC58P3-201ENST00000590792 430 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 AC087468.1-201ENST00000604365 630 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 Z82195.1-201ENST00000604558 398 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 RNU6-84P-201ENST00000607737 102 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 AC090912.3-201ENST00000609775 533 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 AL034408.1-202ENST00000636088 415 ntBASIC3.59□□□□□ -1.83
CCDC88CQ9P219 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
CCDC88CQ9P219 CASC19-284ENST00000642142 1868 ntBASIC3.59□□□□□ -1.84
CCDC88CQ9P219 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC88CQ9P219 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCDC88CQ9P219 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 Z97055.1-201ENST00000419730 712 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 Z74696.2-201ENST00000436514 498 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 FGF7P3-201ENST00000454645 303 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC106707.2-201ENST00000484182 374 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AL358913.1-201ENST00000554342 121 ntBASIC3.58□□□□□ -1.84
CCDC88CQ9P219 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC88CQ9P219 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms