Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 UBE2D3P1-201ENST00000436669 444 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 GTF2IP7-202ENST00000436677 309 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 RPL7P11-201ENST00000437586 658 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AL137845.2-201ENST00000444292 988 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 RN7SL738P-201ENST00000470264 297 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 RN7SL319P-201ENST00000480656 221 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC073522.1-201ENST00000483312 377 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 RN7SL558P-201ENST00000497468 299 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC111193.1-201ENST00000504097 155 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 NDUFB4P12-201ENST00000513465 390 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AL671862.1-201ENST00000515851 349 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 POLR2KP1-201ENST00000553226 168 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC008015.1-201ENST00000555505 465 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC087477.6-201ENST00000559595 843 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 MIR3912-201ENST00000577566 105 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 MIR4270-201ENST00000581799 70 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 RNF138P2-201ENST00000603490 592 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC121247.2-201ENST00000604776 136 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC099676.1-201ENST00000608886 657 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AL603755.1-201ENST00000619504 163 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC087821.2-201ENST00000637086 450 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 SMG1P6-201ENST00000532337 2930 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 AC026951.1-201ENST00000559530 2459 ntBASIC4.99□□□□□ -1.61
USP29Q9HBJ7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
USP29Q9HBJ7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC010329.2-201ENST00000595195 2737 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 Y_RNA.192-201ENST00000363977 102 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL592291.1-201ENST00000403830 352 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RNU2-50P-201ENST00000410494 143 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 E2F6P2-201ENST00000420708 748 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RPL7P53-201ENST00000421245 739 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL645608.4-201ENST00000423619 154 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RPL21P43-201ENST00000425440 472 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL390023.1-201ENST00000428836 262 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC008072.1-201ENST00000434254 824 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RSL24D1P3-201ENST00000449255 495 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL513533.1-201ENST00000453728 415 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 ANKRD26P4-201ENST00000455755 950 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC108471.1-201ENST00000513977 287 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 RNU6-709P-201ENST00000517257 104 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 HMGB1P19-201ENST00000517578 577 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 IGJP1-201ENST00000522682 475 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC010198.2-201ENST00000550612 259 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AL049839.1-201ENST00000556151 657 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 NIFKP8-201ENST00000560500 874 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC090888.1-201ENST00000561335 1141 ntBASIC4.98□□□□□ -1.61
USP29Q9HBJ7 AC135628.1-201ENST00000568867 534 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms