Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
KRTAP4-3Q9BYR4 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
KRTAP4-3Q9BYR4 AL008638.3-201ENST00000623027 5182 ntBASIC2.29□□□□□ -2.04
KRTAP4-3Q9BYR4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP4-3Q9BYR4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC2.29□□□□□ -2.04
KRTAP4-3Q9BYR4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
KRTAP4-3Q9BYR4 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
KRTAP4-3Q9BYR4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KRTAP4-3Q9BYR4 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 UG0898H09-202ENST00000623646 7040 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC008725.1-201ENST00000605123 2263 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AL391987.6-201ENST00000305671 199 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC010894.1-201ENST00000313760 361 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RPL9P7-201ENST00000330965 580 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RPL11P4-201ENST00000332269 436 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-490P-201ENST00000362985 107 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU1-65P-201ENST00000363919 148 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-670P-201ENST00000364312 104 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 SNORD14.1-201ENST00000365609 90 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-398P-201ENST00000384143 109 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-1124P-201ENST00000384169 107 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-1013P-201ENST00000384180 107 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 MIR569-201ENST00000385228 96 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RNU6-328P-201ENST00000390887 106 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AL590762.1-201ENST00000391782 432 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC026310.1-201ENST00000396004 378 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 SMARCE1P6-201ENST00000398372 1216 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 GAPDHP42-201ENST00000406848 981 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 DPPA2P3-201ENST00000411853 655 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 CYP4F32P-201ENST00000426492 504 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 BX890604.2-201ENST00000427883 474 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC133104.1-201ENST00000429100 218 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AL392003.1-201ENST00000434394 243 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 GAPDHP59-201ENST00000435908 267 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC074290.1-201ENST00000448883 135 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC133965.1-201ENST00000452984 354 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 TRGVB-201ENST00000453257 471 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AL353752.1-201ENST00000454946 260 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 HMGB1P4-201ENST00000455362 567 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC092798.1-201ENST00000458542 409 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RPS26P11-201ENST00000463445 348 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AC103987.1-201ENST00000473394 348 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RPS26P6-201ENST00000475156 348 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 RPS14P8-201ENST00000478778 369 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 AL049874.2-201ENST00000492636 288 ntBASIC2.28□□□□□ -2.04
KRTAP4-3Q9BYR4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms