Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ATE1-AS1-202ENST00000636460 506 ntBASIC5.16□□□□□ -1.58
SMOQ99835 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SMOQ99835 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.16□□□□□ -1.58
SMOQ99835 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.16□□□□□ -1.58
SMOQ99835 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 AC008758.3-201ENST00000507003 1829 ntBASIC5.16□□□□□ -1.58
SMOQ99835 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.16□□□□□ -1.58
SMOQ99835 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SMOQ99835 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SMOQ99835 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SMOQ99835 AC097461.1-201ENST00000568928 2821 ntBASIC5.15□□□□□ -1.58
SMOQ99835 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SMOQ99835 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.15□□□□□ -1.58
SMOQ99835 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SMOQ99835 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.58
SMOQ99835 Z99496.1-201ENST00000469424 1477 ntBASIC5.15□□□□□ -1.58
SMOQ99835 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SMOQ99835 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
SMOQ99835 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SMOQ99835 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.15□□□□□ -1.58
SMOQ99835 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SMOQ99835 VPS35P1-201ENST00000563400 1518 ntBASIC5.15□□□□□ -1.58
SMOQ99835 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMOQ99835 RNU6-249P-201ENST00000363016 102 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AL355379.1-201ENST00000405542 640 ntBASIC5.15□□□□□ -1.59
SMOQ99835 RNA5SP113-201ENST00000410486 84 ntBASIC5.15□□□□□ -1.59
SMOQ99835 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.15□□□□□ -1.59
SMOQ99835 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 NPM1P11-201ENST00000417106 855 ntBASIC5.15□□□□□ -1.59
SMOQ99835 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 MUPP-201ENST00000438111 566 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 RPS7P5-201ENST00000441482 581 ntBASIC5.15□□□□□ -1.59
SMOQ99835 TPTE2P6-202ENST00000445572 1007 ntBASIC5.15□□□□□ -1.59
SMOQ99835 ELOCP30-201ENST00000447108 299 ntBASIC5.15□□□□□ -1.59
SMOQ99835 SLC25A18P1-201ENST00000449385 454 ntBASIC5.15□□□□□ -1.59
SMOQ99835 RPL12P26-201ENST00000452430 487 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 AL356981.1-201ENST00000454879 684 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.15□□□□□ -1.59
SMOQ99835 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.15□□□□□ -1.59
SMOQ99835 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.15□□□□□ -1.59
SMOQ99835 AC073073.1-201ENST00000493920 463 ntBASIC5.15□□□□□ -1.59
SMOQ99835 RPS6P4-201ENST00000494693 758 ntBASIC5.15□□□□□ -1.59
SMOQ99835 IGBP1P5-201ENST00000507524 1000 ntBASIC5.15□□□□□ -1.59
SMOQ99835 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 MTND3P5-201ENST00000512798 333 ntBASIC5.15□□□□□ -1.59
SMOQ99835 RNU6-1225P-201ENST00000516336 65 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 AC105031.1-201ENST00000518550 476 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.59
SMOQ99835 AL049839.1-201ENST00000556151 657 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.15□□□□□ -1.59
SMOQ99835 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.15□□□□□ -1.59
SMOQ99835 AC127024.5-201ENST00000580085 462 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AF131215.7-201ENST00000602443 707 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AP003973.1-201ENST00000604639 691 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AC116651.1-201ENST00000609724 556 ntBASIC5.15□□□□□ -1.59
SMOQ99835 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AL158063.1-201ENST00000615349 536 ntBASIC5.15□□□□□ -1.59
SMOQ99835 uc_338.9-201ENST00000617424 182 ntBASIC5.15□□□□□ -1.59
SMOQ99835 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.15□□□□□ -1.59
SMOQ99835 AC068792.1-201ENST00000621354 417 ntBASIC5.15□□□□□ -1.59
SMOQ99835 CR381572.2-201ENST00000624852 397 ntBASIC5.15□□□□□ -1.59
SMOQ99835 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMOQ99835 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.15□□□□□ -1.59
SMOQ99835 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SMOQ99835 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SMOQ99835 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
SMOQ99835 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMOQ99835 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SMOQ99835 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMOQ99835 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SMOQ99835 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMOQ99835 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
SMOQ99835 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMOQ99835 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SMOQ99835 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SMOQ99835 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.14□□□□□ -1.59
SMOQ99835 U3.30-201ENST00000391308 210 ntBASIC5.14□□□□□ -1.59
SMOQ99835 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SMOQ99835 Y_RNA.599-201ENST00000410489 109 ntBASIC5.14□□□□□ -1.59
SMOQ99835 RNU6-920P-201ENST00000410926 92 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AL139128.1-201ENST00000413921 941 ntBASIC5.14□□□□□ -1.59
SMOQ99835 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms