Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
IFT140Q96RY7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
IFT140Q96RY7 VDAC2P1-201ENST00000399358 958 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.05□□□□□ -1.44
IFT140Q96RY7 OR1AA1P-201ENST00000419597 916 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 BX842559.1-201ENST00000419615 532 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 AC006480.1-201ENST00000449887 378 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 AC023141.12-201ENST00000512399 199 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 RN7SKP46-201ENST00000515942 234 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.05□□□□□ -1.44
IFT140Q96RY7 AC008011.1-201ENST00000545989 227 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.05□□□□□ -1.44
IFT140Q96RY7 AC007066.2-202ENST00000566531 914 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 AC006023.1-201ENST00000603944 259 ntBASIC6.05□□□□□ -1.44
IFT140Q96RY7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
IFT140Q96RY7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.05□□□□□ -1.44
IFT140Q96RY7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
IFT140Q96RY7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
IFT140Q96RY7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.04□□□□□ -1.44
IFT140Q96RY7 RN7SKP111-201ENST00000410349 271 ntBASIC6.04□□□□□ -1.44
IFT140Q96RY7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.04□□□□□ -1.44
IFT140Q96RY7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.04□□□□□ -1.44
IFT140Q96RY7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.04□□□□□ -1.44
IFT140Q96RY7 AC009852.2-201ENST00000567898 485 ntBASIC6.04□□□□□ -1.44
IFT140Q96RY7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC6.04□□□□□ -1.44
IFT140Q96RY7 AL451007.1-201ENST00000595491 289 ntBASIC6.04□□□□□ -1.44
IFT140Q96RY7 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 SNORD91B-202ENST00000608459 222 ntBASIC6.04□□□□□ -1.44
IFT140Q96RY7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 AC092111.2-201ENST00000611627 1414 ntBASIC6.04□□□□□ -1.44
IFT140Q96RY7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC6.04□□□□□ -1.44
IFT140Q96RY7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
IFT140Q96RY7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
IFT140Q96RY7 AC008065.1-201ENST00000428525 348 ntBASIC6.03□□□□□ -1.44
IFT140Q96RY7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.03□□□□□ -1.44
IFT140Q96RY7 DEFB109F-201ENST00000491870 277 ntBASIC6.03□□□□□ -1.44
IFT140Q96RY7 PTGES3P3-201ENST00000511479 482 ntBASIC6.03□□□□□ -1.44
IFT140Q96RY7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC6.03□□□□□ -1.44
IFT140Q96RY7 AL591424.2-201ENST00000617023 128 ntBASIC6.03□□□□□ -1.44
IFT140Q96RY7 AC110801.1-201ENST00000623590 212 ntBASIC6.03□□□□□ -1.44
IFT140Q96RY7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.03□□□□□ -1.44
IFT140Q96RY7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
IFT140Q96RY7 AC125336.1-201ENST00000508893 2827 ntBASIC6.03□□□□□ -1.44
IFT140Q96RY7 ZNF807-201ENST00000328088 1707 ntBASIC6.03□□□□□ -1.44
IFT140Q96RY7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
IFT140Q96RY7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
IFT140Q96RY7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.03□□□□□ -1.44
IFT140Q96RY7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.44
IFT140Q96RY7 COTL1P1-201ENST00000422309 375 ntBASIC6.02□□□□□ -1.44
IFT140Q96RY7 AL645931.1-201ENST00000439737 410 ntBASIC6.02□□□□□ -1.44
IFT140Q96RY7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC6.02□□□□□ -1.44
IFT140Q96RY7 MTND6P32-201ENST00000457611 483 ntBASIC6.02□□□□□ -1.44
IFT140Q96RY7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.02□□□□□ -1.44
IFT140Q96RY7 RNA5SP341-201ENST00000516261 117 ntBASIC6.02□□□□□ -1.44
IFT140Q96RY7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
IFT140Q96RY7 AC090877.1-201ENST00000561418 344 ntBASIC6.02□□□□□ -1.44
IFT140Q96RY7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.44
IFT140Q96RY7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.02□□□□□ -1.44
IFT140Q96RY7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
IFT140Q96RY7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
IFT140Q96RY7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
IFT140Q96RY7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
IFT140Q96RY7 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
IFT140Q96RY7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
IFT140Q96RY7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
IFT140Q96RY7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
IFT140Q96RY7 GSTA8P-201ENST00000404253 637 ntBASIC6.02□□□□□ -1.45
IFT140Q96RY7 AL024507.1-201ENST00000412741 274 ntBASIC6.02□□□□□ -1.45
IFT140Q96RY7 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.02□□□□□ -1.45
IFT140Q96RY7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.02□□□□□ -1.45
IFT140Q96RY7 MRPL35P4-201ENST00000453682 566 ntBASIC6.02□□□□□ -1.45
IFT140Q96RY7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.02□□□□□ -1.45
IFT140Q96RY7 AC006445.1-201ENST00000491925 405 ntBASIC6.02□□□□□ -1.45
IFT140Q96RY7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC6.02□□□□□ -1.45
IFT140Q96RY7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.02□□□□□ -1.45
IFT140Q96RY7 UBE2NP1-201ENST00000545592 458 ntBASIC6.02□□□□□ -1.45
IFT140Q96RY7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.02□□□□□ -1.45
IFT140Q96RY7 AC138965.3-201ENST00000623875 498 ntBASIC6.02□□□□□ -1.45
IFT140Q96RY7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
IFT140Q96RY7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
IFT140Q96RY7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 RNU6-316P-201ENST00000391027 107 ntBASIC6.01□□□□□ -1.45
IFT140Q96RY7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
IFT140Q96RY7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms