Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.76□□□□□ -1.49
ERCC4Q92889 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.76□□□□□ -1.49
ERCC4Q92889 AP000936.2-201ENST00000447151 681 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC4Q92889 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 AC109486.1-201ENST00000486833 374 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 RN7SL184P-201ENST00000488308 297 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC4Q92889 DYNLL1P6-201ENST00000503440 264 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 RNU6-720P-201ENST00000516363 108 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AC106038.2-201ENST00000520706 568 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.76□□□□□ -1.49
ERCC4Q92889 AP002963.1-201ENST00000530590 184 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC4Q92889 POLR2KP1-201ENST00000553226 168 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 AC074051.3-201ENST00000570238 358 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 RN7SL435P-201ENST00000584418 282 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC4Q92889 AC095055.1-201ENST00000603472 1113 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 AL136363.2-201ENST00000604173 851 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 AC145207.9-201ENST00000623802 325 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 PCMTD1P7-201ENST00000634506 357 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC4Q92889 Z95327.2-201ENST00000414579 1873 ntBASIC5.76□□□□□ -1.49
ERCC4Q92889 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC4Q92889 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.75□□□□□ -1.49
ERCC4Q92889 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ERCC4Q92889 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 SNORA62.2-201ENST00000364672 152 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 MIR217-201ENST00000384817 110 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 Z99497.1-201ENST00000421282 135 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AL139148.1-201ENST00000427122 680 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AC009238.2-201ENST00000431026 355 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 CYCSP11-201ENST00000436426 315 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 RPS29P10-201ENST00000439197 166 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.75□□□□□ -1.49
ERCC4Q92889 BTF3P6-201ENST00000448054 499 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 PNPLA4P1-201ENST00000458328 305 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.75□□□□□ -1.49
ERCC4Q92889 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 RPL7P6-201ENST00000480903 738 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AC068724.1-201ENST00000487100 792 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 HMGB3P13-201ENST00000511263 607 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 ATP5LP3-201ENST00000514223 304 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 RNU2-30P-201ENST00000516209 141 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 RNU6-1225P-201ENST00000516336 65 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 IGKV2D-10-201ENST00000520194 281 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
ERCC4Q92889 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 AC007225.2-201ENST00000562529 256 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
ERCC4Q92889 AC006362.1-201ENST00000567392 174 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC4Q92889 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.75□□□□□ -1.49
ERCC4Q92889 AP000648.2-201ENST00000624182 404 ntBASIC5.75□□□□□ -1.49
ERCC4Q92889 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.75□□□□□ -1.49
ERCC4Q92889 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.75□□□□□ -1.49
ERCC4Q92889 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.75□□□□□ -1.49
ERCC4Q92889 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC4Q92889 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
ERCC4Q92889 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ERCC4Q92889 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC4Q92889 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
ERCC4Q92889 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ERCC4Q92889 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC4Q92889 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC4Q92889 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms