Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 U3.45-201ENST00000607547 219 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 DDX18P6-201ENST00000450119 1997 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AL159987.2-201ENST00000432754 307 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AP001486.1-201ENST00000463339 476 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AC084198.1-201ENST00000477747 402 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 RN7SL323P-201ENST00000494712 295 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 RNA5SP164-201ENST00000516533 110 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 SUMO2P20-201ENST00000520803 283 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 EIF1P6-201ENST00000600054 334 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AL606490.9-201ENST00000603331 271 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 AL391497.1-201ENST00000608671 547 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 U6.105-201ENST00000637379 88 ntBASIC3.91□□□□□ -1.78
SHROOM3Q8TF72 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHROOM3Q8TF72 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
SHROOM3Q8TF72 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SHROOM3Q8TF72 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHROOM3Q8TF72 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SHROOM3Q8TF72 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.9□□□□□ -1.78
SHROOM3Q8TF72 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 RNA5SP39-201ENST00000411245 120 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 AC017078.1-201ENST00000416146 368 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 AC004552.1-201ENST00000419089 348 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 Z97055.1-201ENST00000419730 712 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 Z74696.2-201ENST00000436514 498 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 AC114982.2-201ENST00000461396 358 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 RPS26P3-201ENST00000470205 348 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 AC090543.2-201ENST00000483963 348 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 AC004057.1-201ENST00000485827 348 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 RPS3AP50-201ENST00000487064 803 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 LDHBP3-201ENST00000514909 822 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 HMGB1P50-201ENST00000605814 607 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 AL442067.2-201ENST00000614033 363 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 AC091905.1-201ENST00000624400 311 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 MTND5P1-201ENST00000445440 1375 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 LINC00561-201ENST00000565815 2738 ntBASIC3.9□□□□□ -1.79
SHROOM3Q8TF72 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AL133244.1-201ENST00000456007 258 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 BX510359.1-201ENST00000456973 237 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AC108941.1-201ENST00000502853 530 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 KATNBL1P4-201ENST00000503545 918 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 KLKP1-201ENST00000595979 403 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AC068790.5-201ENST00000602741 355 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 MRPS35P3-201ENST00000603189 709 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AL137246.1-201ENST00000607072 977 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 MIR8058-201ENST00000615737 89 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 AL079305.1-201ENST00000623159 3008 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 XKRY2-202ENST00000623874 1581 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 XKRY-202ENST00000624960 1581 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 SNORA48.2-201ENST00000390926 124 ntBASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM3Q8TF72 ATP5F1P4-201ENST00000397288 746 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms