Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.81□□□□□ -1.64
SNED1Q8TER0 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNA5SP72-201ENST00000364442 117 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 MIR620-201ENST00000385232 95 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 MIR199A2-201ENST00000385289 110 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 NDUFB4P4-201ENST00000404822 243 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC005726.1-201ENST00000494679 427 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC093534.1-201ENST00000504977 132 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 U3.45-201ENST00000607547 219 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC112503.2-201ENST00000609005 552 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AP000484.1-201ENST00000620067 1252 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC090772.4-201ENST00000623599 362 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC008993.2-201ENST00000631744 806 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 MAPK10-320ENST00000641462 6696 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 Z95331.1-201ENST00000623075 23112 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC006484.1-201ENST00000435086 1884 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNU1-15P-201ENST00000353977 144 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNA5SP51-201ENST00000364750 119 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNU6-1320P-201ENST00000390838 107 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNU6-1269P-201ENST00000391139 107 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 OR51A6P-201ENST00000418680 1004 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 MAPRE1P3-201ENST00000435438 796 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 MTCO3P43-201ENST00000440974 771 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 OFD1P3Y-201ENST00000453312 783 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNU6-599P-201ENST00000459383 107 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNU6-1193P-201ENST00000459461 107 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC107015.1-201ENST00000466902 747 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC021146.3-201ENST00000511911 260 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC023158.1-201ENST00000561632 1025 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 MIR5195-201ENST00000583555 115 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 OR51C1P-201ENST00000608504 942 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 AC091046.2-201ENST00000620775 665 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNU6-368P-201ENST00000620928 107 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 RNU6-538P-201ENST00000622329 107 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SNED1Q8TER0 AL136520.1-201ENST00000600311 1322 ntBASIC4.8□□□□□ -1.64
SNED1Q8TER0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNED1Q8TER0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNED1Q8TER0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AC093775.1-201ENST00000624154 1868 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNED1Q8TER0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNED1Q8TER0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 Z95327.2-201ENST00000414579 1873 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNED1Q8TER0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 AL592494.2-201ENST00000425455 1548 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNED1Q8TER0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.79□□□□□ -1.64
SNED1Q8TER0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNED1Q8TER0 SOD2P1-201ENST00000396543 562 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AL139039.2-201ENST00000407436 479 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 ATP5A1P2-201ENST00000412323 255 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 PGBD4P8-201ENST00000412993 562 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 HMGB3P10-201ENST00000434734 572 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 AL590762.3-201ENST00000436372 640 ntBASIC4.79□□□□□ -1.64
SNED1Q8TER0 XKRYP6-201ENST00000440468 1116 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms