Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.53□□□□□ -2
CSMD3Q7Z407 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CSMD3Q7Z407 RPL5P18-201ENST00000406671 891 ntBASIC2.53□□□□□ -2.01
CSMD3Q7Z407 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.53□□□□□ -2.01
CSMD3Q7Z407 AC108938.1-201ENST00000451204 136 ntBASIC2.53□□□□□ -2.01
CSMD3Q7Z407 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.53□□□□□ -2.01
CSMD3Q7Z407 AC103843.2-201ENST00000530523 682 ntBASIC2.53□□□□□ -2.01
CSMD3Q7Z407 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.53□□□□□ -2.01
CSMD3Q7Z407 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
CSMD3Q7Z407 AC007496.3-201ENST00000624987 3443 ntBASIC2.53□□□□□ -2.01
CSMD3Q7Z407 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
CSMD3Q7Z407 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CSMD3Q7Z407 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.53□□□□□ -2.01
CSMD3Q7Z407 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 GNG5P1-201ENST00000255500 204 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC093698.1-201ENST00000423843 571 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AL158071.1-201ENST00000430315 461 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 RPL21P11-201ENST00000461458 483 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 COX6B1P6-201ENST00000522347 255 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC015922.4-201ENST00000612568 690 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 RNA5SP50-201ENST00000363731 107 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 BX890604.2-201ENST00000427883 474 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC005476.1-201ENST00000554427 397 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC007998.5-201ENST00000622938 237 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC104581.5-201ENST00000624171 7141 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 LINC00561-201ENST00000565815 2738 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 Z99755.1-201ENST00000414048 380 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC000041.1-201ENST00000439655 175 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 PPP1R11P1-201ENST00000486095 376 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC025554.1-201ENST00000505641 188 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 AC067852.3-201ENST00000589177 561 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 PCA3_2.1-201ENST00000612507 409 ntBASIC2.52□□□□□ -2.01
CSMD3Q7Z407 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.52□□□□□ -2.01
CSMD3Q7Z407 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 RPS15AP29-201ENST00000445539 400 ntBASIC2.51□□□□□ -2.01
CSMD3Q7Z407 DNAJC19P8-201ENST00000452887 259 ntBASIC2.51□□□□□ -2.01
CSMD3Q7Z407 CREM-238ENST00000488741 651 ntTSL 2 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 AC108734.1-201ENST00000439549 399 ntBASIC2.51□□□□□ -2.01
CSMD3Q7Z407 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 MAPK10-322ENST00000641485 4530 ntBASIC2.51□□□□□ -2.01
CSMD3Q7Z407 AC004944.1-201ENST00000517807 3059 ntBASIC2.51□□□□□ -2.01
CSMD3Q7Z407 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 TAF9BP1-201ENST00000396646 746 ntBASIC2.51□□□□□ -2.01
CSMD3Q7Z407 AC011742.1-201ENST00000431448 434 ntBASIC2.51□□□□□ -2.01
CSMD3Q7Z407 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 AL121603.1-201ENST00000553815 142 ntBASIC2.51□□□□□ -2.01
CSMD3Q7Z407 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
CSMD3Q7Z407 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC006504.1-201ENST00000562493 3666 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 AC004656.1-201ENST00000568479 4951 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 RNA5SP293-201ENST00000410527 113 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 BMS1P22-201ENST00000414726 313 ntBASIC2.5□□□□□ -2.01
CSMD3Q7Z407 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CSMD3Q7Z407 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms