Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC109454.4-201ENST00000623411 649 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC073342.3-201ENST00000624211 193 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AC055839.1-201ENST00000634467 498 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AL355852.1-201ENST00000454081 1771 ntBASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NHLRC1Q6VVB1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC021146.4-201ENST00000309229 279 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL590240.1-201ENST00000334118 313 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 RN7SKP115-201ENST00000363177 317 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 RNU5B-4P-201ENST00000363508 111 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 RNU6-236P-201ENST00000363886 106 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 RNVU1-6-201ENST00000364688 164 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 RNU6-444P-201ENST00000383988 108 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 MIR153-1-201ENST00000384914 90 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 MIR16-1-201ENST00000385271 89 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL049697.2-201ENST00000403708 294 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 BTBD10P2-201ENST00000404779 676 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 LIPT1P1-201ENST00000415870 1186 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 OR2X1P-201ENST00000421144 687 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 GTF2IP2-201ENST00000424290 697 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL360081.1-201ENST00000428299 555 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 USP9YP9-201ENST00000429406 715 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 RPS7P2-201ENST00000435134 607 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 ARF4P4-201ENST00000439608 520 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL049829.1-201ENST00000465411 156 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 RPL21P71-201ENST00000465598 459 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 MTND4LP2-201ENST00000502312 285 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC118282.2-201ENST00000508739 374 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 DYNLL1P4-201ENST00000549314 266 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 MIR4504-201ENST00000577413 92 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 MIR4480-201ENST00000582492 71 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC002487.1-201ENST00000604565 994 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC024940.4-201ENST00000605507 246 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 OR7A19P-201ENST00000608051 733 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC013468.1-201ENST00000608680 598 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AP004247.3-201ENST00000608682 624 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC124016.2-201ENST00000610058 665 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL049539.1-201ENST00000611964 459 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC105227.2-201ENST00000615075 605 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL109620.1-201ENST00000618738 1197 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL138960.2-201ENST00000625145 535 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 AC068254.2-201ENST00000623938 3577 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 MFSD8-216ENST00000641147 4009 ntBASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
NHLRC1Q6VVB1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 MAPK10-303ENST00000641324 3959 ntBASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 NOL8P1-201ENST00000508336 3529 ntBASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 RNU5B-1-201ENST00000363286 116 ntBASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 RNU6-1293P-201ENST00000384077 107 ntBASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 SNORA70F-201ENST00000384142 135 ntBASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 AL024507.1-201ENST00000412741 274 ntBASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.1□□□□□ -1.75
NHLRC1Q6VVB1 OR51A3P-201ENST00000413596 924 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms