Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AC080014.1-201ENST00000496877 1201 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AC079171.1-201ENST00000568788 914 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AC009159.1-201ENST00000618386 642 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 HSPD1P14-201ENST00000432666 1618 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AL138885.1-201ENST00000405921 675 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 NACAP7-201ENST00000407371 609 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 BX890604.2-201ENST00000427883 474 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 RPS27AP15-201ENST00000447672 466 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 RNA5SP341-201ENST00000516261 117 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 CKS1BP3-201ENST00000600888 237 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 RPL12P50-201ENST00000603116 116 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 AL353726.1-201ENST00000614041 1000 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RIF1Q5UIP0 ZNF807-201ENST00000328088 1707 ntBASIC3.61□□□□□ -1.83
RIF1Q5UIP0 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 RNA5SP80-201ENST00000410475 111 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AC005002.1-201ENST00000447458 540 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 U3.44-201ENST00000458938 192 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 RPL23AP65-201ENST00000475608 468 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AC091544.4-201ENST00000555268 342 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AC016839.1-201ENST00000578162 867 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 SNORD17-201ENST00000390930 237 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 HMGB3P9-201ENST00000441799 583 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 SETD6P1-201ENST00000444575 317 ntBASIC3.6□□□□□ -1.83
RIF1Q5UIP0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RIF1Q5UIP0 HSPA8P17-201ENST00000427029 1382 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 XGY1-201ENST00000381172 446 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 AC079809.1-201ENST00000415468 276 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 AC093698.1-201ENST00000423843 571 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 AC104058.1-201ENST00000448028 297 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 AP002884.2-201ENST00000471647 395 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 YWHAEP4-201ENST00000505390 198 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 PHBP14-201ENST00000512887 367 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 AC024341.1-201ENST00000526444 1552 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 MIR3162-201ENST00000581818 82 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 AL132656.3-201ENST00000606384 1595 ntBASIC3.59□□□□□ -1.83
RIF1Q5UIP0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RIF1Q5UIP0 SCN1A-220ENST00000641603 12506 ntBASIC3.59□□□□□ -1.84
RIF1Q5UIP0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 AC234772.1-201ENST00000377927 937 ntBASIC3.59□□□□□ -1.84
RIF1Q5UIP0 BTF3P9-201ENST00000418784 283 ntBASIC3.59□□□□□ -1.84
RIF1Q5UIP0 AL139413.1-201ENST00000421309 217 ntBASIC3.59□□□□□ -1.84
RIF1Q5UIP0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 HMGB1P18-201ENST00000438801 619 ntBASIC3.59□□□□□ -1.84
RIF1Q5UIP0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 AC109925.1-201ENST00000478069 331 ntBASIC3.59□□□□□ -1.84
RIF1Q5UIP0 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 IGKV2-38-201ENST00000517443 247 ntBASIC3.59□□□□□ -1.84
RIF1Q5UIP0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RIF1Q5UIP0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 AC017079.2-201ENST00000416102 485 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 RPL23AP25-201ENST00000430973 463 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms