Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RPL7P24-201ENST00000493052 752 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 SNORD116-26-201ENST00000516006 96 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 MIR4697-201ENST00000582977 78 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AL139286.1-201ENST00000604465 483 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 OR6R2P-201ENST00000609216 300 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC239803.2-201ENST00000610161 430 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC023043.4-201ENST00000612081 449 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AC000123.2-201ENST00000623124 461 ntBASIC3.81□□□□□ -1.8
HMGCS1Q01581 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.81□□□□□ -1.8
HMGCS1Q01581 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HMGCS1Q01581 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AL121657.1-201ENST00000327215 531 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 MIR421-201ENST00000365696 85 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AL138785.1-201ENST00000425821 331 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 HIGD1AP4-201ENST00000430194 280 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 MRPL50P1-201ENST00000431951 384 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 HMGB1P37-201ENST00000439613 609 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 RANP8-201ENST00000444720 713 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 YWHAQP9-201ENST00000445891 512 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC104306.1-201ENST00000449702 371 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 RPL23AP71-201ENST00000470966 469 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 MTND6P6-201ENST00000478031 263 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AL132838.2-201ENST00000492041 314 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC005912.1-201ENST00000495392 255 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC002456.2-201ENST00000509356 380 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC010342.1-201ENST00000514047 877 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 MIR4716-201ENST00000579628 84 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC009318.3-201ENST00000616916 503 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 AC090506.2-201ENST00000624521 419 ntBASIC3.8□□□□□ -1.8
HMGCS1Q01581 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HMGCS1Q01581 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.8□□□□□ -1.8
HMGCS1Q01581 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS1Q01581 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS1Q01581 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS1Q01581 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HMGCS1Q01581 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 RNA5SP130-201ENST00000364431 114 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 GCNT6-201ENST00000379591 934 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 AL022722.2-201ENST00000402519 180 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 AC083863.1-201ENST00000438811 231 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 ARL5AP3-201ENST00000439327 386 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 Z99127.2-201ENST00000441426 334 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 MTND3P4-201ENST00000453537 303 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 AL121877.1-201ENST00000453704 622 ntBASIC3.79□□□□□ -1.8
HMGCS1Q01581 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGCS1Q01581 RPS6P4-201ENST00000494693 758 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms