Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF4P78317 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF4P78317 RN7SKP67-201ENST00000515905 235 ntBASIC5.65□□□□□ -1.5
RNF4P78317 Y_RNA.675-201ENST00000516389 149 ntBASIC5.65□□□□□ -1.5
RNF4P78317 RNU6-445P-201ENST00000516949 107 ntBASIC5.65□□□□□ -1.5
RNF4P78317 RNU6-1003P-201ENST00000517099 105 ntBASIC5.65□□□□□ -1.5
RNF4P78317 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF4P78317 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF4P78317 OR5AN2P-201ENST00000534535 896 ntBASIC5.65□□□□□ -1.5
RNF4P78317 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF4P78317 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF4P78317 HIF1AP1-201ENST00000553642 175 ntBASIC5.65□□□□□ -1.5
RNF4P78317 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF4P78317 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF4P78317 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF4P78317 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RNF4P78317 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF4P78317 AL360012.1-201ENST00000602813 131 ntBASIC5.65□□□□□ -1.5
RNF4P78317 AC079315.1-201ENST00000602952 623 ntBASIC5.65□□□□□ -1.5
RNF4P78317 BNIP3P10-201ENST00000605360 577 ntBASIC5.65□□□□□ -1.5
RNF4P78317 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF4P78317 AC090948.2-201ENST00000607363 564 ntBASIC5.65□□□□□ -1.5
RNF4P78317 AC093788.1-201ENST00000609356 927 ntBASIC5.65□□□□□ -1.5
RNF4P78317 AC015712.7-201ENST00000615211 635 ntBASIC5.65□□□□□ -1.5
RNF4P78317 AC096861.1-201ENST00000616652 240 ntBASIC5.65□□□□□ -1.5
RNF4P78317 AC009159.1-201ENST00000618386 642 ntBASIC5.65□□□□□ -1.5
RNF4P78317 U6.101-201ENST00000637707 76 ntBASIC5.65□□□□□ -1.5
RNF4P78317 AC022031.1-201ENST00000585985 2593 ntBASIC5.65□□□□□ -1.51
RNF4P78317 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF4P78317 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF4P78317 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.65□□□□□ -1.51
RNF4P78317 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.64□□□□□ -1.51
RNF4P78317 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF4P78317 AC093849.1-201ENST00000563631 2209 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AP002512.4-202ENST00000641599 4530 ntBASIC5.64□□□□□ -1.51
RNF4P78317 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RNF4P78317 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.64□□□□□ -1.51
RNF4P78317 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF4P78317 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 OR5J1P-201ENST00000313544 939 ntBASIC5.64□□□□□ -1.51
RNF4P78317 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 Y_RNA.86-201ENST00000363020 111 ntBASIC5.64□□□□□ -1.51
RNF4P78317 Y_RNA.381-201ENST00000365666 102 ntBASIC5.64□□□□□ -1.51
RNF4P78317 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
RNF4P78317 AC004386.1-201ENST00000393214 761 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AL356057.2-201ENST00000403318 432 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AL078604.1-201ENST00000404609 466 ntBASIC5.64□□□□□ -1.51
RNF4P78317 GAPDHP42-201ENST00000406848 981 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AL357752.1-201ENST00000412817 349 ntBASIC5.64□□□□□ -1.51
RNF4P78317 RPS17P17-201ENST00000419392 409 ntBASIC5.64□□□□□ -1.51
RNF4P78317 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 AC008850.1-201ENST00000427546 362 ntBASIC5.64□□□□□ -1.51
RNF4P78317 RPL37P1-201ENST00000432310 284 ntBASIC5.64□□□□□ -1.51
RNF4P78317 FTLP19-201ENST00000433300 394 ntBASIC5.64□□□□□ -1.51
RNF4P78317 ACTR3P2-201ENST00000439585 1257 ntBASIC5.64□□□□□ -1.51
RNF4P78317 ARPC3P5-201ENST00000448802 534 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AC132479.1-201ENST00000449160 144 ntBASIC5.64□□□□□ -1.51
RNF4P78317 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF4P78317 AL645937.3-201ENST00000453647 936 ntBASIC5.64□□□□□ -1.51
RNF4P78317 HMGN3P1-201ENST00000453847 193 ntBASIC5.64□□□□□ -1.51
RNF4P78317 RNU6-420P-201ENST00000458780 107 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AC026410.2-201ENST00000460281 156 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF4P78317 AC005912.1-201ENST00000495392 255 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF4P78317 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF4P78317 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 RN7SKP238-201ENST00000516483 249 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AC104986.1-201ENST00000517978 436 ntBASIC5.64□□□□□ -1.51
RNF4P78317 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.64□□□□□ -1.51
RNF4P78317 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RNF4P78317 AC018442.3-201ENST00000523025 183 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF4P78317 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 AC008127.2-201ENST00000549925 1075 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.64□□□□□ -1.51
RNF4P78317 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF4P78317 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 AC025449.1-201ENST00000603896 529 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AC007621.1-201ENST00000604544 437 ntBASIC5.64□□□□□ -1.51
RNF4P78317 AC078899.5-201ENST00000612475 178 ntBASIC5.64□□□□□ -1.51
RNF4P78317 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 AC016745.2-201ENST00000608834 3443 ntBASIC5.64□□□□□ -1.51
RNF4P78317 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF4P78317 MSL3P1-202ENST00000440028 1468 ntBASIC5.64□□□□□ -1.51
RNF4P78317 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF4P78317 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF4P78317 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF4P78317 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RNF4P78317 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF4P78317 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms