Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.76□□□□□ -1.81
LMO4P61968 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.76□□□□□ -1.81
LMO4P61968 AC107068.1-201ENST00000563286 4218 ntBASIC3.76□□□□□ -1.81
LMO4P61968 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LMO4P61968 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 RNU6-252P-201ENST00000363232 107 ntBASIC3.76□□□□□ -1.81
LMO4P61968 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 AL080315.1-201ENST00000406055 466 ntBASIC3.76□□□□□ -1.81
LMO4P61968 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 RNA5SP296-201ENST00000410523 111 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 USP9YP21-201ENST00000420603 432 ntBASIC3.76□□□□□ -1.81
LMO4P61968 DEFB130D-201ENST00000426866 237 ntBASIC3.76□□□□□ -1.81
LMO4P61968 RPS12P10-201ENST00000427031 377 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.76□□□□□ -1.81
LMO4P61968 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.76□□□□□ -1.81
LMO4P61968 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AL031663.1-201ENST00000437445 219 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.76□□□□□ -1.81
LMO4P61968 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 RN7SL303P-201ENST00000469773 251 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC109327.1-201ENST00000471666 403 ntBASIC3.76□□□□□ -1.81
LMO4P61968 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.76□□□□□ -1.81
LMO4P61968 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.76□□□□□ -1.81
LMO4P61968 RPL21P131-201ENST00000497298 483 ntBASIC3.76□□□□□ -1.81
LMO4P61968 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.76□□□□□ -1.81
LMO4P61968 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AC133963.2-201ENST00000513686 578 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.76□□□□□ -1.81
LMO4P61968 AC107918.3-201ENST00000533272 382 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 TOMM20P2-201ENST00000540082 421 ntBASIC3.76□□□□□ -1.81
LMO4P61968 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.76□□□□□ -1.81
LMO4P61968 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.76□□□□□ -1.81
LMO4P61968 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AC109446.2-201ENST00000567872 497 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AC023575.1-201ENST00000580510 358 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 MIR3138-201ENST00000585238 82 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AC079610.2-201ENST00000604818 690 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.76□□□□□ -1.81
LMO4P61968 MIR6716-201ENST00000613413 80 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC011939.3-201ENST00000613686 466 ntBASIC3.76□□□□□ -1.81
LMO4P61968 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 VN1R9P-201ENST00000614184 867 ntBASIC3.76□□□□□ -1.81
LMO4P61968 MIR7973-1-201ENST00000614683 76 ntBASIC3.76□□□□□ -1.81
LMO4P61968 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
LMO4P61968 PHKBP1-201ENST00000450951 1951 ntBASIC3.76□□□□□ -1.81
LMO4P61968 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 DHX9P1-201ENST00000436565 3076 ntBASIC3.76□□□□□ -1.81
LMO4P61968 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.76□□□□□ -1.81
LMO4P61968 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LMO4P61968 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LMO4P61968 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.75□□□□□ -1.81
LMO4P61968 MTND5P11-201ENST00000511037 1812 ntBASIC3.75□□□□□ -1.81
LMO4P61968 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.75□□□□□ -1.81
LMO4P61968 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC3.75□□□□□ -1.81
LMO4P61968 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.75□□□□□ -1.81
LMO4P61968 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LMO4P61968 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LMO4P61968 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
LMO4P61968 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LMO4P61968 RNU6-1005P-201ENST00000384519 107 ntBASIC3.75□□□□□ -1.81
LMO4P61968 OR6C69P-201ENST00000394268 893 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AP002784.2-201ENST00000397300 549 ntBASIC3.75□□□□□ -1.81
LMO4P61968 GSTM3P2-201ENST00000412746 530 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AC013404.1-201ENST00000413068 249 ntBASIC3.75□□□□□ -1.81
LMO4P61968 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.75□□□□□ -1.81
LMO4P61968 LINC01347-201ENST00000417964 355 ntBASIC3.75□□□□□ -1.81
LMO4P61968 HMGB1P49-201ENST00000418882 569 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms