Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL355493.4-201ENST00000618530 292 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.33□□□□□ -1.72
CLDN20P56880 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
CLDN20P56880 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CLDN20P56880 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLDN20P56880 TLK1P1-201ENST00000456760 2440 ntBASIC4.33□□□□□ -1.72
CLDN20P56880 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN20P56880 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN20P56880 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN20P56880 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN20P56880 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLDN20P56880 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CLDN20P56880 MTND4P8-201ENST00000514997 1362 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 OR14L1P-202ENST00000641545 3009 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 BMS1P3-201ENST00000372011 932 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 RNU6-413P-201ENST00000384115 107 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 SNORA40.2-201ENST00000390847 128 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CLDN20P56880 AL160275.2-201ENST00000412010 394 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN20P56880 MTND2P16-201ENST00000419987 799 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 LINC00993-201ENST00000420453 540 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 PDSS1P1-201ENST00000422953 1114 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AL645608.4-201ENST00000423619 154 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN20P56880 CNOT7P1-201ENST00000429006 852 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 NRBF2P3-201ENST00000432731 865 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 ACTR3P2-201ENST00000439585 1257 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.32□□□□□ -1.72
CLDN20P56880 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN20P56880 AC099063.2-201ENST00000446360 662 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 MTND1P31-201ENST00000449206 961 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN20P56880 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN20P56880 AC015724.1-201ENST00000478577 156 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.32□□□□□ -1.72
CLDN20P56880 MTCO2P15-201ENST00000532655 656 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.32□□□□□ -1.72
CLDN20P56880 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 AC090695.1-201ENST00000561269 1222 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AC093249.4-201ENST00000564755 259 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 RN7SL802P-201ENST00000577858 299 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AC119501.1-201ENST00000603646 475 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 ELOCP35-201ENST00000604289 336 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AC010200.2-201ENST00000605098 235 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AC096553.1-201ENST00000605169 829 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AL355816.1-201ENST00000607951 118 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AP005137.2-201ENST00000609238 400 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AC012414.7-202ENST00000622705 1090 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 AP002967.1-201ENST00000624203 539 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 CR392039.4-201ENST00000624968 501 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN20P56880 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN20P56880 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN20P56880 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN20P56880 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CLDN20P56880 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN20P56880 AC092162.3-201ENST00000624511 1624 ntBASIC4.32□□□□□ -1.72
CLDN20P56880 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLDN20P56880 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLDN20P56880 RNU1-108P-201ENST00000362556 161 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLDN20P56880 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLDN20P56880 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 FCF1P5-201ENST00000406490 482 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 OR51A3P-201ENST00000413596 924 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 RPL6P29-201ENST00000414863 865 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 VPS26BP1-201ENST00000417155 755 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLDN20P56880 AC005005.2-201ENST00000420779 380 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
CLDN20P56880 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN20P56880 AC005154.2-201ENST00000438110 379 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN20P56880 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.31□□□□□ -1.72
CLDN20P56880 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.31□□□□□ -1.72
CLDN20P56880 RPL36AP15-201ENST00000444514 266 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 PTENP1-201ENST00000447117 1215 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 AC233982.1-201ENST00000451247 436 ntBASIC4.31□□□□□ -1.72
CLDN20P56880 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms