Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH13P55290 AC234064.1-201ENST00000436312 247 ntBASIC4.38□□□□□ -1.71
CDH13P55290 PTMAP6-201ENST00000439110 327 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH13P55290 HMGB1P48-201ENST00000446155 598 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH13P55290 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH13P55290 RPS3AP53-201ENST00000454716 778 ntBASIC4.38□□□□□ -1.71
CDH13P55290 RPS3AP41-201ENST00000462701 778 ntBASIC4.38□□□□□ -1.71
CDH13P55290 PRDX3P4-201ENST00000470828 747 ntBASIC4.38□□□□□ -1.71
CDH13P55290 RPS27P23-201ENST00000487608 251 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH13P55290 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH13P55290 AC118282.2-201ENST00000508739 374 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH13P55290 HPRT1P1-201ENST00000509498 657 ntBASIC4.38□□□□□ -1.71
CDH13P55290 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH13P55290 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH13P55290 RNU6-276P-201ENST00000516114 96 ntBASIC4.38□□□□□ -1.71
CDH13P55290 RN7SKP157-201ENST00000516174 282 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH13P55290 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH13P55290 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.38□□□□□ -1.71
CDH13P55290 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH13P55290 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH13P55290 MTND6P33-201ENST00000571794 183 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CDH13P55290 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH13P55290 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH13P55290 AC008759.1-201ENST00000589783 983 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AC245884.10-201ENST00000597355 337 ntBASIC4.38□□□□□ -1.71
CDH13P55290 BPIFA4P-203ENST00000603168 689 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AP004247.3-201ENST00000608682 624 ntBASIC4.38□□□□□ -1.71
CDH13P55290 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH13P55290 SNX18P1Y-201ENST00000616231 511 ntBASIC4.38□□□□□ -1.71
CDH13P55290 AC010608.3-201ENST00000625048 527 ntBASIC4.38□□□□□ -1.71
CDH13P55290 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH13P55290 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH13P55290 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH13P55290 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH13P55290 Z98755.1-201ENST00000407015 1384 ntBASIC4.38□□□□□ -1.71
CDH13P55290 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH13P55290 A2MP1-204ENST00000566278 4130 ntBASIC4.38□□□□□ -1.71
CDH13P55290 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH13P55290 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH13P55290 AL592437.2-201ENST00000421655 2434 ntBASIC4.37□□□□□ -1.71
CDH13P55290 CPHL1P-201ENST00000461341 3407 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC138393.1-206ENST00000540997 1886 ntBASIC4.37□□□□□ -1.71
CDH13P55290 LINC00622-201ENST00000562811 1570 ntBASIC4.37□□□□□ -1.71
CDH13P55290 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH13P55290 AC067945.1-201ENST00000342609 618 ntBASIC4.37□□□□□ -1.71
CDH13P55290 RNA5SP22-201ENST00000365393 109 ntBASIC4.37□□□□□ -1.71
CDH13P55290 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CDH13P55290 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH13P55290 MIR659-201ENST00000384963 97 ntBASIC4.37□□□□□ -1.71
CDH13P55290 MTCO1P56-201ENST00000401674 224 ntBASIC4.37□□□□□ -1.71
CDH13P55290 RN7SKP278-201ENST00000410504 342 ntBASIC4.37□□□□□ -1.71
CDH13P55290 OR51A3P-201ENST00000413596 924 ntBASIC4.37□□□□□ -1.71
CDH13P55290 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH13P55290 AC027644.1-201ENST00000419595 298 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC062016.2-201ENST00000420950 676 ntBASIC4.37□□□□□ -1.71
CDH13P55290 RPL30P3-201ENST00000424262 333 ntBASIC4.37□□□□□ -1.71
CDH13P55290 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
CDH13P55290 AC104837.2-201ENST00000427236 424 ntBASIC4.37□□□□□ -1.71
CDH13P55290 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH13P55290 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH13P55290 AL358794.1-201ENST00000445689 381 ntBASIC4.37□□□□□ -1.71
CDH13P55290 RPL7P61-201ENST00000451721 751 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC012671.1-201ENST00000451912 203 ntBASIC4.37□□□□□ -1.71
CDH13P55290 IFNWP4-201ENST00000453148 294 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH13P55290 APOOP2-201ENST00000461561 539 ntBASIC4.37□□□□□ -1.71
CDH13P55290 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH13P55290 RPS26P28-201ENST00000470806 348 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC008897.1-201ENST00000494006 347 ntBASIC4.37□□□□□ -1.71
CDH13P55290 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH13P55290 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH13P55290 TPT1P8-201ENST00000510120 555 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH13P55290 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH13P55290 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.37□□□□□ -1.71
CDH13P55290 RN7SKP96-201ENST00000516948 297 ntBASIC4.37□□□□□ -1.71
CDH13P55290 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH13P55290 MTND1P6-201ENST00000523621 946 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH13P55290 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH13P55290 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH13P55290 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH13P55290 UBE2FP2-201ENST00000566646 462 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC016180.1-201ENST00000567945 403 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC091042.1-201ENST00000579213 173 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AP005119.2-201ENST00000579735 1105 ntBASIC4.37□□□□□ -1.71
CDH13P55290 MIR3934-201ENST00000579806 107 ntBASIC4.37□□□□□ -1.71
CDH13P55290 MIR4666A-201ENST00000580160 79 ntBASIC4.37□□□□□ -1.71
CDH13P55290 MIR4737-201ENST00000583979 81 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC091488.1-201ENST00000604239 660 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AL133338.2-201ENST00000604292 736 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AL121652.1-201ENST00000608851 448 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AL138721.1-201ENST00000616756 179 ntBASIC4.37□□□□□ -1.71
CDH13P55290 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms