Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC124312.6-202ENST00000623624 418 ntBASIC4.16□□□□□ -1.74
CDH6P55285 MIR492-201ENST00000638676 116 ntBASIC4.16□□□□□ -1.74
CDH6P55285 AC009452.1-201ENST00000640823 606 ntBASIC4.16□□□□□ -1.74
CDH6P55285 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH6P55285 AC007529.1-201ENST00000418574 2178 ntBASIC4.16□□□□□ -1.74
CDH6P55285 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH6P55285 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH6P55285 AC017002.4-201ENST00000604721 1525 ntBASIC4.16□□□□□ -1.74
CDH6P55285 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH6P55285 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH6P55285 MAPK10-253ENST00000641010 4072 ntBASIC4.16□□□□□ -1.74
CDH6P55285 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH6P55285 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CDH6P55285 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH6P55285 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.74
CDH6P55285 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH6P55285 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CDH6P55285 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CDH6P55285 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CDH6P55285 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH6P55285 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH6P55285 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDH6P55285 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH6P55285 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH6P55285 AL022722.2-201ENST00000402519 180 ntBASIC4.15□□□□□ -1.75
CDH6P55285 AC087650.1-201ENST00000431445 468 ntBASIC4.15□□□□□ -1.75
CDH6P55285 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH6P55285 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH6P55285 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH6P55285 HMGB3P21-201ENST00000452483 547 ntBASIC4.15□□□□□ -1.75
CDH6P55285 RPL23AP12-201ENST00000467573 473 ntBASIC4.15□□□□□ -1.75
CDH6P55285 RPL7P19-201ENST00000469948 618 ntBASIC4.15□□□□□ -1.75
CDH6P55285 RPS26P15-201ENST00000488067 348 ntBASIC4.15□□□□□ -1.75
CDH6P55285 RNU6-491P-201ENST00000516099 110 ntBASIC4.15□□□□□ -1.75
CDH6P55285 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH6P55285 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH6P55285 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH6P55285 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH6P55285 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH6P55285 AC007424.1-203ENST00000554613 687 ntBASIC4.15□□□□□ -1.75
CDH6P55285 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH6P55285 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.15□□□□□ -1.75
CDH6P55285 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH6P55285 AL049844.2-201ENST00000604280 628 ntBASIC4.15□□□□□ -1.75
CDH6P55285 AC083809.1-201ENST00000615051 472 ntBASIC4.15□□□□□ -1.75
CDH6P55285 AC123768.4-201ENST00000616244 701 ntBASIC4.15□□□□□ -1.75
CDH6P55285 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH6P55285 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH6P55285 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH6P55285 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH6P55285 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH6P55285 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH6P55285 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH6P55285 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CDH6P55285 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CDH6P55285 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH6P55285 RNA5SP130-201ENST00000364431 114 ntBASIC4.14□□□□□ -1.75
CDH6P55285 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH6P55285 AC068538.1-201ENST00000376856 336 ntBASIC4.14□□□□□ -1.75
CDH6P55285 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH6P55285 RNU6-31P-201ENST00000384388 108 ntBASIC4.14□□□□□ -1.75
CDH6P55285 RPL31P52-201ENST00000407532 367 ntBASIC4.14□□□□□ -1.75
CDH6P55285 RNA5SP39-201ENST00000411245 120 ntBASIC4.14□□□□□ -1.75
CDH6P55285 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH6P55285 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH6P55285 AL356806.1-201ENST00000422524 916 ntBASIC4.14□□□□□ -1.75
CDH6P55285 AL138785.1-201ENST00000425821 331 ntBASIC4.14□□□□□ -1.75
CDH6P55285 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH6P55285 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH6P55285 AC096638.2-201ENST00000434965 711 ntBASIC4.14□□□□□ -1.75
CDH6P55285 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH6P55285 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH6P55285 RPS11P1-201ENST00000451072 473 ntBASIC4.14□□□□□ -1.75
CDH6P55285 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.14□□□□□ -1.75
CDH6P55285 AP000926.1-201ENST00000479573 241 ntBASIC4.14□□□□□ -1.75
CDH6P55285 AC104997.1-201ENST00000519761 717 ntBASIC4.14□□□□□ -1.75
CDH6P55285 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH6P55285 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH6P55285 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDH6P55285 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.14□□□□□ -1.75
CDH6P55285 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH6P55285 RNU4-89P-201ENST00000607443 133 ntBASIC4.14□□□□□ -1.75
CDH6P55285 AL645927.2-201ENST00000618350 349 ntBASIC4.14□□□□□ -1.75
CDH6P55285 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDH6P55285 CFTRP2-201ENST00000634304 199 ntBASIC4.14□□□□□ -1.75
CDH6P55285 AC022893.2-201ENST00000564832 3296 ntBASIC4.14□□□□□ -1.75
CDH6P55285 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH6P55285 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDH6P55285 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH6P55285 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH6P55285 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDH6P55285 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH6P55285 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.14□□□□□ -1.75
CDH6P55285 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.14□□□□□ -1.75
CDH6P55285 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDH6P55285 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH6P55285 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDH6P55285 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CDH6P55285 RNA5SP399-201ENST00000364003 117 ntBASIC4.13□□□□□ -1.75
CDH6P55285 SNORA70.2-201ENST00000364506 135 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms