Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 NECAP1P2-201ENST00000455668 727 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AP000942.1-201ENST00000463969 747 ntBASIC5.08□□□□□ -1.6
COPB1P53618 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.08□□□□□ -1.6
COPB1P53618 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 AC091435.1-201ENST00000505442 584 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AC113347.3-201ENST00000509113 148 ntBASIC5.08□□□□□ -1.6
COPB1P53618 HMGB1P1-201ENST00000522557 636 ntBASIC5.08□□□□□ -1.6
COPB1P53618 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.08□□□□□ -1.6
COPB1P53618 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.08□□□□□ -1.6
COPB1P53618 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.08□□□□□ -1.6
COPB1P53618 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.08□□□□□ -1.6
COPB1P53618 AC105129.1-201ENST00000560250 297 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.08□□□□□ -1.6
COPB1P53618 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.08□□□□□ -1.6
COPB1P53618 MTCYBP33-201ENST00000575007 1130 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.08□□□□□ -1.6
COPB1P53618 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 DPRXP5-201ENST00000604662 539 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AC121247.2-201ENST00000604776 136 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AL158042.1-201ENST00000605338 460 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AL583856.2-201ENST00000606298 543 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.08□□□□□ -1.6
COPB1P53618 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.08□□□□□ -1.6
COPB1P53618 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 AC091905.4-201ENST00000623432 202 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AC007671.2-201ENST00000637344 619 ntBASIC5.08□□□□□ -1.6
COPB1P53618 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.08□□□□□ -1.6
COPB1P53618 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COPB1P53618 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
COPB1P53618 AC083843.3-201ENST00000623679 2186 ntBASIC5.08□□□□□ -1.6
COPB1P53618 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.08□□□□□ -1.6
COPB1P53618 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
COPB1P53618 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 AC135352.1-201ENST00000506173 1418 ntBASIC5.07□□□□□ -1.6
COPB1P53618 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.07□□□□□ -1.6
COPB1P53618 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.07□□□□□ -1.6
COPB1P53618 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 A2MP1-204ENST00000566278 4130 ntBASIC5.07□□□□□ -1.6
COPB1P53618 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.07□□□□□ -1.6
COPB1P53618 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 FAM133CP-201ENST00000332869 704 ntBASIC5.07□□□□□ -1.6
COPB1P53618 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.07□□□□□ -1.6
COPB1P53618 RNA5SP123-201ENST00000363244 119 ntBASIC5.07□□□□□ -1.6
COPB1P53618 RNU6-413P-201ENST00000384115 107 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AL035419.1-201ENST00000397037 564 ntBASIC5.07□□□□□ -1.6
COPB1P53618 RSL24D1P4-201ENST00000400938 484 ntBASIC5.07□□□□□ -1.6
COPB1P53618 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 HDGFP1-201ENST00000405943 252 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.07□□□□□ -1.6
COPB1P53618 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 AC073143.1-201ENST00000436316 395 ntBASIC5.07□□□□□ -1.6
COPB1P53618 UBE2D3P1-201ENST00000436669 444 ntBASIC5.07□□□□□ -1.6
COPB1P53618 GSTA7P-201ENST00000438425 448 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AL445567.1-201ENST00000439121 144 ntBASIC5.07□□□□□ -1.6
COPB1P53618 ARL5AP2-201ENST00000444698 533 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.07□□□□□ -1.6
COPB1P53618 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.07□□□□□ -1.6
COPB1P53618 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.07□□□□□ -1.6
COPB1P53618 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.07□□□□□ -1.6
COPB1P53618 HIGD1AP8-201ENST00000453927 274 ntBASIC5.07□□□□□ -1.6
COPB1P53618 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 RPL23AP65-201ENST00000475608 468 ntBASIC5.07□□□□□ -1.6
COPB1P53618 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.07□□□□□ -1.6
COPB1P53618 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.07□□□□□ -1.6
COPB1P53618 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 PDCL2P2-201ENST00000533651 189 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 AC008033.2-201ENST00000542626 177 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.07□□□□□ -1.6
COPB1P53618 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.07□□□□□ -1.6
COPB1P53618 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 RN7SL52P-201ENST00000584271 284 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AC091178.1-203ENST00000584586 279 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.07□□□□□ -1.6
COPB1P53618 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.07□□□□□ -1.6
COPB1P53618 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.07□□□□□ -1.6
COPB1P53618 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 AC005084.1-201ENST00000605160 304 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AC008966.2-201ENST00000606157 453 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AL353600.1-201ENST00000608148 251 ntBASIC5.07□□□□□ -1.6
COPB1P53618 VN1R74P-201ENST00000613259 503 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AL356274.1-201ENST00000617064 410 ntBASIC5.07□□□□□ -1.6
COPB1P53618 STMN1P1-201ENST00000617809 440 ntBASIC5.07□□□□□ -1.6
COPB1P53618 AL603755.1-201ENST00000619504 163 ntBASIC5.07□□□□□ -1.6
COPB1P53618 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms