Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC096996.1-201ENST00000563813 325 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC3P19447 AC006272.2-201ENST00000594725 163 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.6□□□□□ -1.35
ERCC3P19447 AL589743.7-201ENST00000612637 233 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 MIR6730-201ENST00000622213 67 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 MIR8080-201ENST00000622224 89 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 AL160394.1-201ENST00000624765 724 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 CASC19-264ENST00000641912 1184 ntBASIC6.6□□□□□ -1.35
ERCC3P19447 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.6□□□□□ -1.35
ERCC3P19447 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
ERCC3P19447 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
ERCC3P19447 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ERCC3P19447 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC3P19447 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
ERCC3P19447 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
ERCC3P19447 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
ERCC3P19447 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
ERCC3P19447 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC3P19447 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
ERCC3P19447 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
ERCC3P19447 Y_RNA.6-201ENST00000362350 114 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 Y_RNA.41-201ENST00000362646 102 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 RNU6-348P-201ENST00000384386 107 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 RNU6-809P-201ENST00000384461 107 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 MIR937-201ENST00000401271 86 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 RNA5SP296-201ENST00000410523 111 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 RPL35AP24-201ENST00000413846 330 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 USP9YP13-201ENST00000417797 480 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.59□□□□□ -1.35
ERCC3P19447 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 MTND1P4-201ENST00000435196 415 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 Z74696.2-201ENST00000436514 498 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 USP9YP12-201ENST00000450481 570 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.59□□□□□ -1.35
ERCC3P19447 RN7SL610P-201ENST00000463845 291 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 RN7SL188P-201ENST00000469842 285 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 RN7SL727P-201ENST00000482164 296 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 RN7SL570P-201ENST00000484405 292 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.59□□□□□ -1.35
ERCC3P19447 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 FABP5P5-201ENST00000515537 406 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 RNA5SP92-201ENST00000516437 110 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 OR4A43P-201ENST00000532938 908 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.59□□□□□ -1.35
ERCC3P19447 EIF1P4-201ENST00000572664 335 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AC137800.2-201ENST00000574375 120 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC6.59□□□□□ -1.35
ERCC3P19447 AC022916.3-201ENST00000592961 742 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 BNIP3P8-201ENST00000597863 560 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.59□□□□□ -1.35
ERCC3P19447 SUGT1P3-202ENST00000604259 383 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AC112187.2-201ENST00000604345 283 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AC008250.2-201ENST00000615261 205 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AL357080.1-201ENST00000617394 239 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AC009237.17-201ENST00000618111 748 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 AC091932.2-201ENST00000623014 291 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ERCC3P19447 HSPA8P14-201ENST00000552265 1805 ntBASIC6.59□□□□□ -1.35
ERCC3P19447 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.59□□□□□ -1.35
ERCC3P19447 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.59□□□□□ -1.36
ERCC3P19447 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.59□□□□□ -1.36
ERCC3P19447 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
ERCC3P19447 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
ERCC3P19447 AL022578.1-201ENST00000439330 1433 ntBASIC6.59□□□□□ -1.36
ERCC3P19447 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
ERCC3P19447 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC3P19447 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ERCC3P19447 AC130304.1-201ENST00000622942 2385 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 PABPC1P6-201ENST00000445594 1829 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.58□□□□□ -1.36
ERCC3P19447 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC3P19447 OR9G4-201ENST00000302957 984 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ERCC3P19447 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ERCC3P19447 Y_RNA.97-201ENST00000363094 102 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 RNA5SP234-201ENST00000363916 119 ntBASIC6.58□□□□□ -1.36
ERCC3P19447 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms