Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.16□□□□□ -1.42
CFTRP13569 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.16□□□□□ -1.42
CFTRP13569 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.16□□□□□ -1.42
CFTRP13569 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC6.16□□□□□ -1.42
CFTRP13569 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.16□□□□□ -1.42
CFTRP13569 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.16□□□□□ -1.42
CFTRP13569 AC011825.1-201ENST00000484967 388 ntBASIC6.16□□□□□ -1.42
CFTRP13569 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CFTRP13569 AC068993.1-201ENST00000546724 589 ntBASIC6.16□□□□□ -1.42
CFTRP13569 AC023161.2-201ENST00000551218 780 ntBASIC6.16□□□□□ -1.42
CFTRP13569 AC009852.2-201ENST00000567898 485 ntBASIC6.16□□□□□ -1.42
CFTRP13569 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CFTRP13569 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CFTRP13569 MFSD8-233ENST00000641482 4860 ntBASIC6.16□□□□□ -1.42
CFTRP13569 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.16□□□□□ -1.42
CFTRP13569 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CFTRP13569 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CFTRP13569 AC008079.2-201ENST00000623543 20396 ntBASIC6.16□□□□□ -1.42
CFTRP13569 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CFTRP13569 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC6.16□□□□□ -1.42
CFTRP13569 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CFTRP13569 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CFTRP13569 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.16□□□□□ -1.42
CFTRP13569 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CFTRP13569 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CFTRP13569 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.15□□□□□ -1.42
CFTRP13569 RN7SKP53-201ENST00000411337 315 ntBASIC6.15□□□□□ -1.42
CFTRP13569 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.15□□□□□ -1.42
CFTRP13569 AC096576.1-201ENST00000489014 359 ntBASIC6.15□□□□□ -1.42
CFTRP13569 AC080014.1-201ENST00000496877 1201 ntBASIC6.15□□□□□ -1.42
CFTRP13569 HMGB1P21-201ENST00000502313 581 ntBASIC6.15□□□□□ -1.42
CFTRP13569 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.15□□□□□ -1.42
CFTRP13569 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.15□□□□□ -1.42
CFTRP13569 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.15□□□□□ -1.42
CFTRP13569 IGHV3-32-201ENST00000519182 355 ntBASIC6.15□□□□□ -1.42
CFTRP13569 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.15□□□□□ -1.42
CFTRP13569 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.15□□□□□ -1.42
CFTRP13569 CKS1BP3-201ENST00000600888 237 ntBASIC6.15□□□□□ -1.42
CFTRP13569 AP000641.1-201ENST00000531988 1639 ntBASIC6.15□□□□□ -1.42
CFTRP13569 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CFTRP13569 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CFTRP13569 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.15□□□□□ -1.43
CFTRP13569 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CFTRP13569 LIPT1P1-201ENST00000415870 1186 ntBASIC6.15□□□□□ -1.43
CFTRP13569 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.15□□□□□ -1.43
CFTRP13569 OR5AW1P-201ENST00000426334 1006 ntBASIC6.15□□□□□ -1.43
CFTRP13569 HSPE1P27-201ENST00000430808 296 ntBASIC6.15□□□□□ -1.43
CFTRP13569 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.15□□□□□ -1.43
CFTRP13569 RPL27AP5-201ENST00000469428 449 ntBASIC6.15□□□□□ -1.43
CFTRP13569 AC037198.2-201ENST00000478845 733 ntBASIC6.15□□□□□ -1.43
CFTRP13569 MORF4L2P1-201ENST00000503761 858 ntBASIC6.15□□□□□ -1.43
CFTRP13569 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.15□□□□□ -1.43
CFTRP13569 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.15□□□□□ -1.43
CFTRP13569 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.15□□□□□ -1.43
CFTRP13569 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.15□□□□□ -1.43
CFTRP13569 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
CFTRP13569 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.15□□□□□ -1.43
CFTRP13569 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.15□□□□□ -1.43
CFTRP13569 MIR4433B-201ENST00000581329 102 ntBASIC6.15□□□□□ -1.43
CFTRP13569 AC119674.1-212ENST00000641155 993 ntBASIC6.15□□□□□ -1.43
CFTRP13569 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CFTRP13569 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.14□□□□□ -1.43
CFTRP13569 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CFTRP13569 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CFTRP13569 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CFTRP13569 VN1R51P-201ENST00000411675 945 ntBASIC6.14□□□□□ -1.43
CFTRP13569 HIGD1AP12-201ENST00000427832 281 ntBASIC6.14□□□□□ -1.43
CFTRP13569 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.14□□□□□ -1.43
CFTRP13569 AC010655.1-201ENST00000449336 292 ntBASIC6.14□□□□□ -1.43
CFTRP13569 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.14□□□□□ -1.43
CFTRP13569 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.14□□□□□ -1.43
CFTRP13569 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.14□□□□□ -1.43
CFTRP13569 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC6.14□□□□□ -1.43
CFTRP13569 AL732618.1-201ENST00000623251 301 ntBASIC6.14□□□□□ -1.43
CFTRP13569 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.14□□□□□ -1.43
CFTRP13569 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CFTRP13569 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CFTRP13569 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CFTRP13569 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.13□□□□□ -1.43
CFTRP13569 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CFTRP13569 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
CFTRP13569 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
CFTRP13569 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CFTRP13569 SNORA80A-201ENST00000363922 136 ntBASIC6.13□□□□□ -1.43
CFTRP13569 BX323014.1-201ENST00000412876 237 ntBASIC6.13□□□□□ -1.43
CFTRP13569 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.13□□□□□ -1.43
CFTRP13569 BX842559.1-201ENST00000419615 532 ntBASIC6.13□□□□□ -1.43
CFTRP13569 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.13□□□□□ -1.43
CFTRP13569 NPM1P25-201ENST00000429734 854 ntBASIC6.13□□□□□ -1.43
CFTRP13569 TMED11P-201ENST00000479478 690 ntBASIC6.13□□□□□ -1.43
CFTRP13569 AC006445.1-201ENST00000491925 405 ntBASIC6.13□□□□□ -1.43
CFTRP13569 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CFTRP13569 UBE2NP1-201ENST00000545592 458 ntBASIC6.13□□□□□ -1.43
CFTRP13569 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6.13□□□□□ -1.43
CFTRP13569 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.13□□□□□ -1.43
CFTRP13569 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CFTRP13569 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CFTRP13569 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CFTRP13569 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.12□□□□□ -1.43
CFTRP13569 IPO8P1-201ENST00000455509 3109 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms