Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 RNU6-40P-201ENST00000384254 107 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC093719.1-202ENST00000392735 373 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 HLFP1-201ENST00000402375 499 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AL590623.1-201ENST00000427864 105 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 HMGB1P37-201ENST00000439613 609 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 ELOCP10-201ENST00000440624 327 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC009263.1-201ENST00000441193 1239 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC006011.1-201ENST00000442758 349 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 RPL7P1-201ENST00000468161 747 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 RPL7P9-201ENST00000468715 747 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC010618.1-201ENST00000469924 477 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 METTL15P1-201ENST00000481421 1045 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 HMGB1P3-201ENST00000502802 616 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC099522.1-202ENST00000514718 367 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC138701.1-201ENST00000524329 714 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC068714.1-201ENST00000559623 800 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 NPM1P47-201ENST00000560843 856 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 ELOCP34-201ENST00000604436 327 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC010200.2-201ENST00000605098 235 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC012557.1-201ENST00000607115 611 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AL391834.1-201ENST00000609609 560 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC239803.2-201ENST00000610161 430 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC124312.6-202ENST00000623624 418 ntBASIC3.55□□□□□ -1.84
HLA-DPB1P04440 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DPB1P04440 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 CEP170P1-201ENST00000502249 4587 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 BX005019.1-201ENST00000561881 1810 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 SNORA60-201ENST00000362396 134 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 RNU6-225P-201ENST00000384613 103 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 RPS27AP11-201ENST00000402798 447 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC009302.1-201ENST00000417147 390 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC048351.1-201ENST00000420064 602 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 IPMKP1-201ENST00000425988 855 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 DPY19L1P2-201ENST00000426647 915 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 RPS26P47-201ENST00000427219 348 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 BTF3P10-201ENST00000433415 495 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC099063.2-201ENST00000446360 662 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 RPL7L1P1-201ENST00000448259 785 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 FABP3P2-201ENST00000453169 399 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 RNA5SP246-201ENST00000458909 119 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 RPL7P24-201ENST00000493052 752 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 HAUS1P1-201ENST00000505275 832 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 KRT19P6-201ENST00000510983 209 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 ELOCP28-201ENST00000590044 317 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 OR52H1-202ENST00000641796 1061 ntBASIC3.54□□□□□ -1.84
HLA-DPB1P04440 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DPB1P04440 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC116667.1-201ENST00000604855 2072 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 CR381670.1-201ENST00000624291 1693 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms