Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA1P02708 MIR5684-201ENST00000585074 65 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 AL133247.2-201ENST00000603236 482 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.48□□□□□ -1.69
CHRNA1P02708 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 AL138721.1-201ENST00000616756 179 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 CR392039.5-201ENST00000623201 510 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 AC055839.1-201ENST00000634467 498 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 OR5BE1P-202ENST00000641168 1176 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CHRNA1P02708 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.48□□□□□ -1.69
CHRNA1P02708 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHRNA1P02708 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
CHRNA1P02708 ERCC6-202ENST00000374127 1782 ntBASIC4.48□□□□□ -1.69
CHRNA1P02708 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA1P02708 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA1P02708 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA1P02708 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA1P02708 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA1P02708 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA1P02708 RNA5SP124-201ENST00000362739 110 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 RNU6-666P-201ENST00000363499 107 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 RNU6-31P-201ENST00000384388 108 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CHRNA1P02708 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA1P02708 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA1P02708 OR2X1P-201ENST00000421144 687 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 EIF4EP1-201ENST00000422311 642 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA1P02708 MRPS33P4-201ENST00000434892 317 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 AC023512.1-201ENST00000444513 499 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 RPS11P1-201ENST00000451072 473 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA1P02708 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.47□□□□□ -1.69
CHRNA1P02708 CDH12P2-201ENST00000504393 298 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 AC108471.1-201ENST00000513977 287 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA1P02708 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA1P02708 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA1P02708 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.47□□□□□ -1.69
CHRNA1P02708 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.47□□□□□ -1.69
CHRNA1P02708 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.47□□□□□ -1.69
CHRNA1P02708 AC005255.1-201ENST00000593748 216 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 AL121772.2-201ENST00000614331 297 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 MIR6075-201ENST00000620782 95 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CHRNA1P02708 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRNA1P02708 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA1P02708 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHRNA1P02708 AC006042.3-201ENST00000454684 1469 ntBASIC4.47□□□□□ -1.69
CHRNA1P02708 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.47□□□□□ -1.69
CHRNA1P02708 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHRNA1P02708 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHRNA1P02708 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHRNA1P02708 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CHRNA1P02708 SNORA27.3-201ENST00000364937 134 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 MIR320B1-201ENST00000390209 79 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA1P02708 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.46□□□□□ -1.7
CHRNA1P02708 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA1P02708 RNA5SP498-201ENST00000411342 120 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA1P02708 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA1P02708 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA1P02708 RPL37P1-201ENST00000432310 284 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA1P02708 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA1P02708 AL133547.1-201ENST00000448546 220 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA1P02708 AL121877.1-201ENST00000453704 622 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 snoU13.22-201ENST00000459428 104 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC091564.1-201ENST00000464563 479 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA1P02708 AC093770.1-201ENST00000511559 571 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC108120.2-201ENST00000512973 294 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA1P02708 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA1P02708 AC063950.1-201ENST00000552036 308 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC068714.1-201ENST00000559623 800 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC084757.1-201ENST00000559987 490 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.46□□□□□ -1.7
CHRNA1P02708 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA1P02708 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA1P02708 AC008759.1-201ENST00000589783 983 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC112230.1-201ENST00000604342 547 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AL592436.1-201ENST00000605135 558 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC009032.1-201ENST00000617574 431 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 AC009237.17-201ENST00000618111 748 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms