Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 OR11H5P-201ENST00000554039 926 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 AC124312.4-201ENST00000605533 310 ntBASIC1.63□□□□□ -2.15
USH2AO75445 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
USH2AO75445 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 MIR199A2-201ENST00000385289 110 ntBASIC1.63□□□□□ -2.15
USH2AO75445 MIR921-201ENST00000401133 56 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC007738.1-201ENST00000413892 348 ntBASIC1.63□□□□□ -2.15
USH2AO75445 PTGES3P3-201ENST00000511479 482 ntBASIC1.63□□□□□ -2.15
USH2AO75445 RN7SKP18-201ENST00000516005 275 ntBASIC1.63□□□□□ -2.15
USH2AO75445 RNA5SP249-201ENST00000516127 99 ntBASIC1.63□□□□□ -2.15
USH2AO75445 RNA5SP208-201ENST00000516156 78 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC063950.1-201ENST00000552036 308 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AP005264.7-201ENST00000625003 745 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AL034408.1-201ENST00000637712 664 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC022031.1-201ENST00000585985 2593 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC093535.2-201ENST00000624769 2326 ntBASIC1.63□□□□□ -2.15
USH2AO75445 HCFC2P1-201ENST00000392864 1592 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC019072.1-201ENST00000604535 1551 ntBASIC1.63□□□□□ -2.15
USH2AO75445 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 AC245054.1-201ENST00000420944 258 ntBASIC1.63□□□□□ -2.15
USH2AO75445 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 AL513175.1-201ENST00000431492 780 ntBASIC1.63□□□□□ -2.15
USH2AO75445 NMNAT1P2-201ENST00000435192 860 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC097262.1-201ENST00000452559 548 ntBASIC1.63□□□□□ -2.15
USH2AO75445 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 CASC19-203ENST00000523510 575 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 AC079089.3-201ENST00000603094 673 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC091905.2-201ENST00000623143 306 ntBASIC1.63□□□□□ -2.15
USH2AO75445 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
USH2AO75445 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
USH2AO75445 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC1.63□□□□□ -2.15
USH2AO75445 AC092447.2-201ENST00000435487 669 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC1.63□□□□□ -2.15
USH2AO75445 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC1.63□□□□□ -2.15
USH2AO75445 GTF3AP2-201ENST00000557014 266 ntBASIC1.63□□□□□ -2.15
USH2AO75445 AP003392.5-201ENST00000607857 415 ntBASIC1.63□□□□□ -2.15
USH2AO75445 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
USH2AO75445 EEF1A1P42-201ENST00000613436 1331 ntBASIC1.62□□□□□ -2.15
USH2AO75445 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.62□□□□□ -2.15
USH2AO75445 AL645937.1-201ENST00000641739 1652 ntBASIC1.62□□□□□ -2.15
USH2AO75445 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC1.62□□□□□ -2.15
USH2AO75445 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.62□□□□□ -2.15
USH2AO75445 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
USH2AO75445 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
USH2AO75445 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AL353705.1-201ENST00000433468 480 ntBASIC1.62□□□□□ -2.15
USH2AO75445 snoU13.23-201ENST00000458863 104 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AC006445.1-201ENST00000491925 405 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC1.62□□□□□ -2.15
USH2AO75445 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
USH2AO75445 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC1.62□□□□□ -2.15
USH2AO75445 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms