Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MIR4284-201ENST00000578924 81 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AL161729.3-201ENST00000603533 673 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AC012603.1-201ENST00000606424 528 ntBASIC3.64□□□□□ -1.83
SGCEO43556 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 AC114781.5-201ENST00000615297 108 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 U7.8-201ENST00000619968 63 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AC010435.1-201ENST00000623353 1177 ntBASIC3.64□□□□□ -1.83
SGCEO43556 AC019080.5-201ENST00000624891 757 ntBASIC3.64□□□□□ -1.83
SGCEO43556 MIR7641-1-201ENST00000627518 61 ntBASIC3.64□□□□□ -1.83
SGCEO43556 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SGCEO43556 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.64□□□□□ -1.83
SGCEO43556 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SGCEO43556 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SGCEO43556 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SGCEO43556 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SGCEO43556 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SGCEO43556 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SGCEO43556 RNF6P1-201ENST00000444889 1784 ntBASIC3.63□□□□□ -1.83
SGCEO43556 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SGCEO43556 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SGCEO43556 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.63□□□□□ -1.83
SGCEO43556 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.63□□□□□ -1.83
SGCEO43556 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SGCEO43556 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.63□□□□□ -1.83
SGCEO43556 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.63□□□□□ -1.83
SGCEO43556 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SGCEO43556 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SGCEO43556 RPL23AP38-201ENST00000423801 469 ntBASIC3.63□□□□□ -1.83
SGCEO43556 RPL18P10-201ENST00000425606 538 ntBASIC3.63□□□□□ -1.83
SGCEO43556 BTF3P10-201ENST00000433415 495 ntBASIC3.63□□□□□ -1.83
SGCEO43556 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.63□□□□□ -1.83
SGCEO43556 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SGCEO43556 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SGCEO43556 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.63□□□□□ -1.83
SGCEO43556 RNA5SP246-201ENST00000458909 119 ntBASIC3.63□□□□□ -1.83
SGCEO43556 UQCRHP4-201ENST00000471686 272 ntBASIC3.63□□□□□ -1.83
SGCEO43556 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
SGCEO43556 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.63□□□□□ -1.83
SGCEO43556 AC106806.2-201ENST00000509365 500 ntBASIC3.63□□□□□ -1.83
SGCEO43556 RNA5SP309-201ENST00000516670 106 ntBASIC3.63□□□□□ -1.83
SGCEO43556 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.63□□□□□ -1.83
SGCEO43556 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.63□□□□□ -1.83
SGCEO43556 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SGCEO43556 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SGCEO43556 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.63□□□□□ -1.83
SGCEO43556 AC069366.1-201ENST00000583159 838 ntBASIC3.63□□□□□ -1.83
SGCEO43556 AC007342.8-201ENST00000623278 678 ntBASIC3.63□□□□□ -1.83
SGCEO43556 AC025125.1-201ENST00000624743 1922 ntBASIC3.63□□□□□ -1.83
SGCEO43556 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SGCEO43556 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SGCEO43556 DCAF13P3-201ENST00000561147 1334 ntBASIC3.63□□□□□ -1.83
SGCEO43556 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.63□□□□□ -1.83
SGCEO43556 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.62□□□□□ -1.83
SGCEO43556 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.62□□□□□ -1.83
SGCEO43556 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SGCEO43556 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SGCEO43556 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SGCEO43556 FAM3C2-201ENST00000312214 681 ntBASIC3.62□□□□□ -1.83
SGCEO43556 MIR124-3-201ENST00000384866 87 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AL161909.1-201ENST00000397390 712 ntBASIC3.62□□□□□ -1.83
SGCEO43556 PGBD4P8-201ENST00000412993 562 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AC114814.2-201ENST00000419195 485 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.62□□□□□ -1.83
SGCEO43556 AJ239321.1-201ENST00000424255 564 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AC073143.1-201ENST00000436316 395 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AL353093.1-201ENST00000441292 436 ntBASIC3.62□□□□□ -1.83
SGCEO43556 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.62□□□□□ -1.83
SGCEO43556 AL157827.1-201ENST00000447622 132 ntBASIC3.62□□□□□ -1.83
SGCEO43556 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.62□□□□□ -1.83
SGCEO43556 RPL29P14-201ENST00000495837 428 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AC021146.7-201ENST00000509604 775 ntBASIC3.62□□□□□ -1.83
SGCEO43556 RNA5SP143-201ENST00000516936 115 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AC034205.1-201ENST00000520621 638 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.62□□□□□ -1.83
SGCEO43556 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.62□□□□□ -1.83
SGCEO43556 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.62□□□□□ -1.83
SGCEO43556 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.62□□□□□ -1.83
SGCEO43556 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.62□□□□□ -1.83
SGCEO43556 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.62□□□□□ -1.83
SGCEO43556 MIR4700-201ENST00000578311 74 ntBASIC3.62□□□□□ -1.83
SGCEO43556 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.62□□□□□ -1.83
SGCEO43556 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.62□□□□□ -1.83
SGCEO43556 MIR3653-201ENST00000625572 110 ntBASIC3.62□□□□□ -1.83
SGCEO43556 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.62□□□□□ -1.83
SGCEO43556 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.62□□□□□ -1.83
SGCEO43556 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SGCEO43556 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SGCEO43556 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
SGCEO43556 ASNSP1-204ENST00000641977 1664 ntBASIC3.62□□□□□ -1.83
SGCEO43556 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SGCEO43556 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SGCEO43556 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SGCEO43556 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.61□□□□□ -1.83
SGCEO43556 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms