Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 AC022790.1-201ENST00000522872 204 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.02□□□□□ -1.77
LSM1O15116 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.02□□□□□ -1.77
LSM1O15116 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 OR4U1P-201ENST00000554958 912 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.02□□□□□ -1.77
LSM1O15116 AC069366.1-201ENST00000583159 838 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AC067852.4-201ENST00000590314 478 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AC022387.2-201ENST00000604050 448 ntBASIC4.02□□□□□ -1.77
LSM1O15116 FAM27D1-201ENST00000612308 341 ntBASIC4.02□□□□□ -1.77
LSM1O15116 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.02□□□□□ -1.77
LSM1O15116 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LSM1O15116 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
LSM1O15116 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 AL137100.1-201ENST00000556703 1620 ntBASIC4.02□□□□□ -1.77
LSM1O15116 AL158163.1-201ENST00000603915 1649 ntBASIC4.02□□□□□ -1.77
LSM1O15116 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LSM1O15116 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.01□□□□□ -1.77
LSM1O15116 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
LSM1O15116 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
LSM1O15116 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 AL353093.1-201ENST00000441292 436 ntBASIC4.01□□□□□ -1.77
LSM1O15116 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.01□□□□□ -1.77
LSM1O15116 HMGB1P5-202ENST00000451497 985 ntBASIC4.01□□□□□ -1.77
LSM1O15116 AC018635.1-201ENST00000468292 1030 ntBASIC4.01□□□□□ -1.77
LSM1O15116 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.01□□□□□ -1.77
LSM1O15116 TRAV31-201ENST00000502780 342 ntBASIC4.01□□□□□ -1.77
LSM1O15116 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 RNA5SP519-201ENST00000516480 119 ntBASIC4.01□□□□□ -1.77
LSM1O15116 RN7SKP92-201ENST00000517266 244 ntBASIC4.01□□□□□ -1.77
LSM1O15116 AC010476.1-201ENST00000519111 851 ntBASIC4.01□□□□□ -1.77
LSM1O15116 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.01□□□□□ -1.77
LSM1O15116 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.01□□□□□ -1.77
LSM1O15116 AC068831.4-201ENST00000556118 109 ntBASIC4.01□□□□□ -1.77
LSM1O15116 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.01□□□□□ -1.77
LSM1O15116 MIR3186-201ENST00000577404 85 ntBASIC4.01□□□□□ -1.77
LSM1O15116 MIR548Y-201ENST00000582739 110 ntBASIC4.01□□□□□ -1.77
LSM1O15116 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.01□□□□□ -1.77
LSM1O15116 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.01□□□□□ -1.77
LSM1O15116 AC024940.4-201ENST00000605507 246 ntBASIC4.01□□□□□ -1.77
LSM1O15116 AC095038.2-201ENST00000621464 1070 ntBASIC4.01□□□□□ -1.77
LSM1O15116 AP005264.7-201ENST00000625003 745 ntBASIC4.01□□□□□ -1.77
LSM1O15116 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.01□□□□□ -1.77
LSM1O15116 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.01□□□□□ -1.77
LSM1O15116 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
LSM1O15116 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
LSM1O15116 PRO1804-201ENST00000623780 2050 ntBASIC4.01□□□□□ -1.77
LSM1O15116 SPATA31D2P-201ENST00000429999 4388 ntBASIC4□□□□□ -1.77
LSM1O15116 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
LSM1O15116 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4□□□□□ -1.77
LSM1O15116 USP8P1-201ENST00000494673 3183 ntBASIC4□□□□□ -1.77
LSM1O15116 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LSM1O15116 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LSM1O15116 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LSM1O15116 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LSM1O15116 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LSM1O15116 RNA5SP505-201ENST00000364748 108 ntBASIC4□□□□□ -1.77
LSM1O15116 RNU6-317P-201ENST00000384031 107 ntBASIC4□□□□□ -1.77
LSM1O15116 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4□□□□□ -1.77
LSM1O15116 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4□□□□□ -1.77
LSM1O15116 RNA5SP332-201ENST00000391063 115 ntBASIC4□□□□□ -1.77
LSM1O15116 SNORA3C-201ENST00000408792 125 ntBASIC4□□□□□ -1.77
LSM1O15116 AC119751.6-201ENST00000416712 186 ntBASIC4□□□□□ -1.77
LSM1O15116 P2RY10P2-201ENST00000416730 913 ntBASIC4□□□□□ -1.77
LSM1O15116 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4□□□□□ -1.77
LSM1O15116 AC092832.1-201ENST00000422934 400 ntBASIC4□□□□□ -1.77
LSM1O15116 VDAC1P6-201ENST00000430062 855 ntBASIC4□□□□□ -1.77
LSM1O15116 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4□□□□□ -1.77
LSM1O15116 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4□□□□□ -1.77
LSM1O15116 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4□□□□□ -1.77
LSM1O15116 MTND2P28-201ENST00000457540 1044 ntBASIC4□□□□□ -1.77
LSM1O15116 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4□□□□□ -1.77
LSM1O15116 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4□□□□□ -1.77
LSM1O15116 AC012170.1-201ENST00000495139 359 ntBASIC4□□□□□ -1.77
LSM1O15116 AK3P4-201ENST00000504283 583 ntBASIC4□□□□□ -1.77
LSM1O15116 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
LSM1O15116 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4□□□□□ -1.77
LSM1O15116 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4□□□□□ -1.77
LSM1O15116 AC093770.1-201ENST00000511559 571 ntBASIC4□□□□□ -1.77
LSM1O15116 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4□□□□□ -1.77
LSM1O15116 RNA5SP49-201ENST00000516450 115 ntBASIC4□□□□□ -1.77
LSM1O15116 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4□□□□□ -1.77
LSM1O15116 NARSP2-201ENST00000518524 679 ntBASIC4□□□□□ -1.77
LSM1O15116 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4□□□□□ -1.77
LSM1O15116 AC100827.5-201ENST00000615883 426 ntBASIC4□□□□□ -1.77
LSM1O15116 Xist_exon1.1-201ENST00000618930 85 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms