Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 HMGB1P5-201ENST00000255320 642 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 Y_RNA.192-201ENST00000363977 102 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 RNU6-157P-201ENST00000383957 107 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 RSL24D1P4-201ENST00000400938 484 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AL356131.1-201ENST00000405826 414 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC140479.3-201ENST00000418944 1126 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 H2AFZP5-201ENST00000446960 382 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 TPMTP4-201ENST00000450749 678 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 ISCUP1-201ENST00000454451 448 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 RNU6-1218P-201ENST00000458990 108 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 RPL7P16-201ENST00000479738 738 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 VPS26AP1-201ENST00000483197 979 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 RN7SKP283-201ENST00000517197 270 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AP003461.1-201ENST00000528866 78 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 SULT1C2P2-201ENST00000562517 294 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC109446.2-201ENST00000567872 497 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC011487.3-201ENST00000593607 453 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC090181.2-201ENST00000602975 672 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC018638.7-201ENST00000605836 1114 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC105227.2-201ENST00000615075 605 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC067852.7-201ENST00000623270 535 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC004777.1-201ENST00000624317 287 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 AC007490.1-201ENST00000624321 703 ntBASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.68□□□□□ -1.66
TCRBV7S3A2A0A539 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AL512646.1-201ENST00000269395 1077 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RNU6-304P-201ENST00000364855 107 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RNA5SP372-201ENST00000390836 115 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 SNORD65.1-201ENST00000390889 71 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 EI24P3-201ENST00000399046 1062 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AL109941.1-201ENST00000401925 229 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RNU4-34P-201ENST00000410431 124 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RNA5SP113-201ENST00000410486 84 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RAP1BP1-201ENST00000412709 553 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 COX6B1P1-201ENST00000415962 213 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RPL7P44-201ENST00000424827 742 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 USP9YP31-201ENST00000431405 881 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AC005154.2-201ENST00000438110 379 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 ARL4AP3-201ENST00000441452 574 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 OR1H1P-201ENST00000448731 937 ntBASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.67□□□□□ -1.66
TCRBV7S3A2A0A539 RPS27P23-201ENST00000487608 251 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms