Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTN3Q9P232 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTN3Q9P232 OR52B3P-201ENST00000314715 928 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 Y_RNA.86-201ENST00000363020 111 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RN7SKP128-201ENST00000364270 303 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RNU6-1322P-201ENST00000364309 107 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RNA5SP500-201ENST00000364486 119 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RNU1-59P-201ENST00000364829 162 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RNU6-908P-201ENST00000410160 94 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RNU2-28P-201ENST00000410457 189 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RNU2-8P-201ENST00000410727 190 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RNU6-195P-201ENST00000411352 109 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 BX323845.3-201ENST00000428215 527 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 RPL22P17-201ENST00000438729 315 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 SDCBPP1-201ENST00000440192 890 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 MTND1P12-201ENST00000455231 147 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 RPL23AP12-201ENST00000467573 473 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RPL36AP51-201ENST00000487216 318 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 FAM172BP-201ENST00000487497 1089 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RPL39P36-201ENST00000490784 156 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC023194.1-201ENST00000493084 308 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC008945.1-201ENST00000505144 499 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC006390.1-201ENST00000508068 283 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC010486.1-201ENST00000511793 424 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC108471.1-201ENST00000513977 287 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 RNU6-1003P-201ENST00000517099 105 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 IGKV2-36-201ENST00000519999 223 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 PCNAP4-201ENST00000532690 730 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC007424.1-203ENST00000554613 687 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC022432.1-201ENST00000595739 310 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 BCRP9-201ENST00000605312 388 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AL138960.1-201ENST00000613838 513 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 U1.25-201ENST00000614085 162 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC009268.2-201ENST00000621925 457 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNTN3Q9P232 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTN3Q9P232 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
CNTN3Q9P232 AC007159.1-201ENST00000566529 4706 ntBASIC6.45□□□□□ -1.38
CNTN3Q9P232 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNTN3Q9P232 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 RNU6-845P-201ENST00000362578 103 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 RNA5SP211-201ENST00000365516 117 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 RNU1-149P-201ENST00000390870 161 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AL121972.1-201ENST00000402023 252 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 RNU2-6P-201ENST00000411404 190 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 MYL6P5-201ENST00000412707 459 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 USP9YP9-201ENST00000429406 715 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 BX679664.2-201ENST00000439282 283 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 RPL17P49-201ENST00000443728 411 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 PPP1R11P1-201ENST00000486095 376 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC013356.1-201ENST00000489027 564 ntBASIC6.44□□□□□ -1.38
CNTN3Q9P232 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.44□□□□□ -1.38
CNTN3Q9P232 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNTN3Q9P232 RN7SKP67-201ENST00000515905 235 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms