Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 RN7SL809P-201ENST00000482040 297 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 UBA52P3-201ENST00000491303 382 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AC108043.1-201ENST00000512696 574 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 MTND4LP31-201ENST00000514859 294 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AL163642.2-201ENST00000604722 1019 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 AC015908.5-201ENST00000623289 343 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 MTND4P26-201ENST00000415971 1359 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 AC009229.4-201ENST00000623854 1947 ntBASIC3.97□□□□□ -1.77
CISHQ9NSE2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.97□□□□□ -1.77
CISHQ9NSE2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CISHQ9NSE2 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.77
CISHQ9NSE2 LINC00561-201ENST00000565815 2738 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 RNU1-64P-201ENST00000365443 163 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.96□□□□□ -1.78
CISHQ9NSE2 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CISHQ9NSE2 RNU1-89P-201ENST00000384592 164 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CISHQ9NSE2 AL590704.1-201ENST00000402856 794 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 AL445189.1-201ENST00000405722 338 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 AL691447.1-201ENST00000419456 387 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CISHQ9NSE2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CISHQ9NSE2 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.96□□□□□ -1.78
CISHQ9NSE2 RNA5SP143-201ENST00000516936 115 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.96□□□□□ -1.78
CISHQ9NSE2 AC008011.1-201ENST00000545989 227 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.96□□□□□ -1.78
CISHQ9NSE2 AC093227.2-201ENST00000589357 285 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 AC087468.1-201ENST00000604365 630 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 AC012557.1-201ENST00000607115 611 ntBASIC3.96□□□□□ -1.78
CISHQ9NSE2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.96□□□□□ -1.78
CISHQ9NSE2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CISHQ9NSE2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CISHQ9NSE2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CISHQ9NSE2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CISHQ9NSE2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CISHQ9NSE2 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 OR52B1P-201ENST00000316506 909 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 RPS24P12-201ENST00000402084 394 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 RPL21P109-201ENST00000422213 475 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AL158073.1-201ENST00000426848 1104 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 AL445584.1-201ENST00000431451 330 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AP000936.3-201ENST00000438127 255 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AL645931.1-201ENST00000439737 410 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 NOTCH2P1-201ENST00000443481 624 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 HMGB3P13-201ENST00000511263 607 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AC005798.1-201ENST00000513715 387 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 AL121766.1-201ENST00000547436 487 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 AL133457.1-201ENST00000564251 987 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 AC244505.7-201ENST00000599675 272 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 AL049634.3-201ENST00000604968 457 ntBASIC3.95□□□□□ -1.78
CISHQ9NSE2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.95□□□□□ -1.78
CISHQ9NSE2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
CISHQ9NSE2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CISHQ9NSE2 ASNSP1-204ENST00000641977 1664 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CISHQ9NSE2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC006504.1-201ENST00000562493 3666 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC017007.4-201ENST00000503353 1352 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CISHQ9NSE2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.94□□□□□ -1.78
CISHQ9NSE2 AC025750.1-201ENST00000399891 379 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 ZNF603P-201ENST00000405613 487 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 RN7SKP56-201ENST00000410513 331 ntBASIC3.94□□□□□ -1.78
CISHQ9NSE2 HMGB3P20-201ENST00000417997 600 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms