Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 AC006539.2-201ENST00000601729 572 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.56□□□□□ -1.52
TLR9Q9NR96 AL592221.1-201ENST00000605266 382 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 AC080013.4-201ENST00000607624 649 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 AC097505.1-201ENST00000610199 565 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TLR9Q9NR96 AL627230.1-201ENST00000613077 211 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 AL591926.8-201ENST00000616876 211 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 MIR7703-201ENST00000620784 77 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.56□□□□□ -1.52
TLR9Q9NR96 AF001550.2-201ENST00000636643 217 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TLR9Q9NR96 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TLR9Q9NR96 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TLR9Q9NR96 AC005539.1-201ENST00000443768 1479 ntBASIC5.56□□□□□ -1.52
TLR9Q9NR96 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TLR9Q9NR96 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.56□□□□□ -1.52
TLR9Q9NR96 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TLR9Q9NR96 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AL355852.1-201ENST00000454081 1771 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AL603750.1-201ENST00000624216 1717 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 NPM1P40-201ENST00000412758 733 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 OR8G2P-201ENST00000412796 908 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC009480.2-201ENST00000422916 432 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 HSPD1P12-201ENST00000429127 1069 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 MTCO1P54-201ENST00000430139 712 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC138761.5-201ENST00000433967 325 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 RHOT1P3-201ENST00000436571 331 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 SUMO2P2-201ENST00000456482 255 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 RPL7P48-201ENST00000461513 746 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 RPL23AP72-201ENST00000492447 435 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 RPSAP51-201ENST00000497462 645 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC109445.1-201ENST00000512356 383 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 BTF3P13-201ENST00000513224 490 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 OR7H2P-201ENST00000513483 306 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 RNU6-416P-201ENST00000516265 103 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 MIR4737-201ENST00000583979 81 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC009220.3-201ENST00000604318 586 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AL359314.1-201ENST00000616913 261 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 AC093311.1-201ENST00000506586 2021 ntBASIC5.55□□□□□ -1.52
TLR9Q9NR96 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TLR9Q9NR96 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.55□□□□□ -1.52
TLR9Q9NR96 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TLR9Q9NR96 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TLR9Q9NR96 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TLR9Q9NR96 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
TLR9Q9NR96 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.54□□□□□ -1.52
TLR9Q9NR96 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TLR9Q9NR96 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
TLR9Q9NR96 AL672167.1-206ENST00000356293 943 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 RN7SKP185-201ENST00000362813 326 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 U3.4-201ENST00000363352 213 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 Y_RNA.359-201ENST00000365498 102 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 SNORA11C-201ENST00000408532 129 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TLR9Q9NR96 RN7SKP142-201ENST00000411236 328 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.54□□□□□ -1.52
TLR9Q9NR96 CDK8P2-201ENST00000415020 547 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 CYP4F29P-201ENST00000420685 446 ntBASIC5.54□□□□□ -1.52
TLR9Q9NR96 RPL7P44-201ENST00000424827 742 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms