Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC074029.4-201ENST00000624796 1859 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 IGKV7-3-201ENST00000357453 298 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 RNU1-89P-201ENST00000384592 164 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AL161909.1-201ENST00000397390 712 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 LINC01347-201ENST00000417964 355 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 CHIAP3-201ENST00000423668 1133 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 NPM1P34-201ENST00000428821 893 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AL353597.2-202ENST00000434901 373 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC096638.2-201ENST00000434965 711 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 RNFT1P2-201ENST00000443064 757 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 RPS4XP4-201ENST00000443195 763 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 YWHAQP9-201ENST00000445891 512 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 RNA5SP246-201ENST00000458909 119 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 RPL7P48-201ENST00000461513 746 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 METTL15P1-201ENST00000481421 1045 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC041039.1-201ENST00000485656 536 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC027338.1-201ENST00000514840 825 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 SNORA31.13-201ENST00000516624 135 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 RNA5SP143-201ENST00000516936 115 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC068714.1-201ENST00000559623 800 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC025627.2-201ENST00000576220 160 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AC005776.1-201ENST00000603164 290 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AP003392.5-201ENST00000607857 415 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AL391834.1-201ENST00000609609 560 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AL445493.3-201ENST00000619568 477 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 AL355480.1-201ENST00000629041 99 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 CFTRP2-201ENST00000634304 199 ntBASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HDHD3Q9BSH5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC009313.2-201ENST00000417893 1941 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC139713.2-214ENST00000642059 1811 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 RAD1P1-201ENST00000231383 813 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 RNU6-984P-201ENST00000363236 109 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 RNA5SP322-201ENST00000363617 119 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 PTGES3P2-201ENST00000407942 482 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC011933.1-201ENST00000413334 321 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AL139128.1-201ENST00000413921 941 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 CBX1P1-201ENST00000440184 427 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC006326.1-201ENST00000445465 787 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 EIF4A1P11-201ENST00000451239 222 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 RNU6-1218P-201ENST00000458990 108 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC116533.1-201ENST00000459748 321 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC025674.1-201ENST00000507074 324 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC099522.1-202ENST00000514718 367 ntBASIC3.38□□□□□ -1.87
HDHD3Q9BSH5 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms